Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 AC015871.2-201ENST00000603605 948 ntBASIC3.89□□□□□ -1.79
LDB2O43679 RPL23AP92-201ENST00000603609 255 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AL592436.1-201ENST00000605135 558 ntBASIC3.89□□□□□ -1.79
LDB2O43679 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 AL445264.1-201ENST00000621719 171 ntBASIC3.89□□□□□ -1.79
LDB2O43679 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB2O43679 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB2O43679 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB2O43679 AL139811.1-201ENST00000424779 2299 ntBASIC3.89□□□□□ -1.79
LDB2O43679 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.89□□□□□ -1.79
LDB2O43679 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LDB2O43679 RNA5SP502-201ENST00000362694 119 ntBASIC3.88□□□□□ -1.79
LDB2O43679 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB2O43679 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB2O43679 RNU6-213P-201ENST00000384051 104 ntBASIC3.88□□□□□ -1.79
LDB2O43679 RNU6-769P-201ENST00000384407 104 ntBASIC3.88□□□□□ -1.79
LDB2O43679 Y_RNA.516-201ENST00000384541 124 ntBASIC3.88□□□□□ -1.79
LDB2O43679 MIR23B-201ENST00000384832 97 ntBASIC3.88□□□□□ -1.79
LDB2O43679 MIR554-201ENST00000384874 96 ntBASIC3.88□□□□□ -1.79
LDB2O43679 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB2O43679 Y_RNA.598-201ENST00000410480 95 ntBASIC3.88□□□□□ -1.79
LDB2O43679 OR8F1P-201ENST00000425243 930 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AL356583.2-201ENST00000426536 280 ntBASIC3.88□□□□□ -1.79
LDB2O43679 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB2O43679 RSU1P2-202ENST00000437884 485 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB2O43679 AL031667.1-201ENST00000440222 725 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AL500522.2-201ENST00000448562 343 ntBASIC3.88□□□□□ -1.79
LDB2O43679 USP9YP12-201ENST00000450481 570 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB2O43679 BX322784.1-201ENST00000455793 1077 ntBASIC3.88□□□□□ -1.79
LDB2O43679 RPL21P11-201ENST00000461458 483 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AL136126.1-201ENST00000473603 402 ntBASIC3.88□□□□□ -1.79
LDB2O43679 S100A11P1-201ENST00000477525 312 ntBASIC3.88□□□□□ -1.79
LDB2O43679 VN1R105P-201ENST00000486595 910 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.88□□□□□ -1.79
LDB2O43679 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB2O43679 AC016065.2-201ENST00000514530 444 ntBASIC3.88□□□□□ -1.79
LDB2O43679 RN7SKP298-201ENST00000515950 94 ntBASIC3.88□□□□□ -1.79
LDB2O43679 MTND4LP18-201ENST00000526864 291 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB2O43679 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB2O43679 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB2O43679 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB2O43679 AC120057.2-201ENST00000571520 271 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB2O43679 BCRP9-201ENST00000605312 388 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AC006566.1-201ENST00000608943 513 ntBASIC3.88□□□□□ -1.79
LDB2O43679 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB2O43679 AC026368.1-201ENST00000614934 690 ntBASIC3.88□□□□□ -1.79
LDB2O43679 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LDB2O43679 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB2O43679 AC009318.4-201ENST00000620496 486 ntBASIC3.88□□□□□ -1.79
LDB2O43679 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB2O43679 FAM157B-203ENST00000639350 358 ntBASIC3.88□□□□□ -1.79
LDB2O43679 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB2O43679 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LDB2O43679 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LDB2O43679 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB2O43679 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LDB2O43679 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LDB2O43679 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
LDB2O43679 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB2O43679 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LDB2O43679 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB2O43679 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
LDB2O43679 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
LDB2O43679 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
LDB2O43679 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB2O43679 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LDB2O43679 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LDB2O43679 Y_RNA.41-201ENST00000362646 102 ntBASIC3.87□□□□□ -1.79
LDB2O43679 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDB2O43679 SNORA40.3-201ENST00000390964 122 ntBASIC3.87□□□□□ -1.79
LDB2O43679 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LDB2O43679 USP9YP13-201ENST00000417797 480 ntBASIC3.87□□□□□ -1.79
LDB2O43679 RPS15AP40-201ENST00000419621 391 ntBASIC3.87□□□□□ -1.79
LDB2O43679 AL513174.1-201ENST00000423182 629 ntBASIC3.87□□□□□ -1.79
LDB2O43679 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LDB2O43679 OR2B8P-201ENST00000432841 938 ntBASIC3.87□□□□□ -1.79
LDB2O43679 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.87□□□□□ -1.79
LDB2O43679 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB2O43679 MTND1P4-201ENST00000435196 415 ntBASIC3.87□□□□□ -1.79
LDB2O43679 AC091862.1-201ENST00000438016 1100 ntBASIC3.87□□□□□ -1.79
LDB2O43679 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB2O43679 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB2O43679 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB2O43679 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB2O43679 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.87□□□□□ -1.79
LDB2O43679 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB2O43679 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB2O43679 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LDB2O43679 AC104563.1-201ENST00000476147 376 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms