Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC092794.1-201ENST00000612734 582 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.3□□□□□ -1.72
PHGDHO43175 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 AC105074.1-201ENST00000623380 3095 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.3□□□□□ -1.72
PHGDHO43175 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 AL133243.3-201ENST00000617415 3004 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PHGDHO43175 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.29□□□□□ -1.72
PHGDHO43175 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.29□□□□□ -1.72
PHGDHO43175 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.29□□□□□ -1.72
PHGDHO43175 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PHGDHO43175 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PHGDHO43175 RNU4-1-201ENST00000363925 141 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 RNA5SP235-201ENST00000365411 114 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 SNORA20.2-201ENST00000383922 131 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 MIR3065-201ENST00000390137 79 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 RNU6-278P-201ENST00000390945 109 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 AL583835.1-201ENST00000399570 407 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 TMSB10P2-201ENST00000416049 131 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 MTCO3P12-201ENST00000416718 547 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 MTND3P17-201ENST00000416968 344 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.29□□□□□ -1.72
PHGDHO43175 ELOCP4-201ENST00000420090 333 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.29□□□□□ -1.72
PHGDHO43175 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.29□□□□□ -1.72
PHGDHO43175 AC007283.2-201ENST00000424739 197 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 RPEP3-201ENST00000425462 676 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.29□□□□□ -1.72
PHGDHO43175 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.29□□□□□ -1.72
PHGDHO43175 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.29□□□□□ -1.72
PHGDHO43175 FCF1P1-201ENST00000432690 571 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.29□□□□□ -1.72
PHGDHO43175 RPL35AP22-201ENST00000436855 335 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AL451074.3-201ENST00000437709 472 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.29□□□□□ -1.72
PHGDHO43175 AL121871.1-201ENST00000443413 436 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 ARL2BPP10-201ENST00000446487 531 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AL136380.1-201ENST00000447970 162 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.29□□□□□ -1.72
PHGDHO43175 AL162591.2-201ENST00000449634 317 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 NDUFS5P3-201ENST00000450668 321 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 C1DP4-201ENST00000455429 424 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.29□□□□□ -1.72
PHGDHO43175 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.29□□□□□ -1.72
PHGDHO43175 AC093899.1-201ENST00000457984 376 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 MTCO2P29-201ENST00000465212 189 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 RN7SL812P-201ENST00000493791 279 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AC135721.1-201ENST00000497954 479 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AK3P4-201ENST00000504283 583 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AC006499.6-201ENST00000511169 607 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AC010493.1-201ENST00000513479 292 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AC026801.2-201ENST00000515352 425 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 RN7SKP244-201ENST00000516513 307 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 RNU6-314P-201ENST00000516574 104 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.29□□□□□ -1.72
PHGDHO43175 HMGN1P28-201ENST00000521340 364 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AP000827.1-201ENST00000527814 258 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.29□□□□□ -1.72
PHGDHO43175 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.29□□□□□ -1.72
PHGDHO43175 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.29□□□□□ -1.72
PHGDHO43175 AL133153.1-201ENST00000557756 303 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AC084783.1-201ENST00000565846 910 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.29□□□□□ -1.72
PHGDHO43175 AC245517.5-201ENST00000611529 162 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 AL592295.2-201ENST00000612578 206 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 U6atac.1-201ENST00000616025 117 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 uc_338.12-201ENST00000616344 181 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 RAD17P1-201ENST00000418130 2042 ntBASIC4.29□□□□□ -1.72
PHGDHO43175 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PHGDHO43175 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PHGDHO43175 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.28□□□□□ -1.72
PHGDHO43175 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PHGDHO43175 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PHGDHO43175 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PHGDHO43175 AC016588.2-201ENST00000632484 3021 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PHGDHO43175 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 RNU6-335P-201ENST00000364563 113 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms