Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AL360181.4-201ENST00000621752 134 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 AL356585.4-201ENST00000623078 1229 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPHP1O15259 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.51□□□□□ -1.69
NPHP1O15259 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPHP1O15259 AC005539.1-201ENST00000443768 1479 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 AF127577.6-201ENST00000623352 2191 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.5□□□□□ -1.69
NPHP1O15259 RNU6-1074P-201ENST00000383995 104 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 AL031679.1-201ENST00000400616 525 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.5□□□□□ -1.69
NPHP1O15259 BX323014.1-201ENST00000412876 237 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 HMGB1P49-201ENST00000418882 569 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 DBIP2-201ENST00000419076 262 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.5□□□□□ -1.69
NPHP1O15259 ATP5JP1-201ENST00000431631 322 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 MTCYBP45-201ENST00000435243 565 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.5□□□□□ -1.69
NPHP1O15259 HMGB1P12-201ENST00000438594 598 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 MTND3P1-201ENST00000441336 220 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 AL662791.1-201ENST00000441992 928 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 RPL7P52-201ENST00000449200 742 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.5□□□□□ -1.69
NPHP1O15259 ST13P14-201ENST00000474095 734 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.5□□□□□ -1.69
NPHP1O15259 AC010342.1-201ENST00000514047 877 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 RNU1-103P-201ENST00000516502 125 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.5□□□□□ -1.69
NPHP1O15259 SUMO2P20-201ENST00000520803 283 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.5□□□□□ -1.69
NPHP1O15259 AL365503.1-201ENST00000605247 905 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 AC090425.2-201ENST00000608818 501 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.5□□□□□ -1.69
NPHP1O15259 AP000484.1-201ENST00000620067 1252 ntBASIC4.5□□□□□ -1.69
NPHP1O15259 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NPHP1O15259 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPHP1O15259 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.49□□□□□ -1.69
NPHP1O15259 MAPK10-373ENST00000641983 6772 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NPHP1O15259 AL022578.1-201ENST00000439330 1433 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
NPHP1O15259 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NPHP1O15259 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NPHP1O15259 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NPHP1O15259 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NPHP1O15259 RNU6-1155P-201ENST00000363554 107 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 RNU2-47P-201ENST00000410649 186 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AMD1P2-201ENST00000412936 992 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.49□□□□□ -1.69
NPHP1O15259 MTCO2P5-201ENST00000422621 426 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AL953862.1-201ENST00000423016 168 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AC093698.1-201ENST00000423843 571 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AC005300.1-201ENST00000428401 373 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.49□□□□□ -1.69
NPHP1O15259 AC115115.1-201ENST00000449927 248 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AC099563.1-201ENST00000456086 418 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 CEACAMP4-201ENST00000457676 421 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.49□□□□□ -1.69
NPHP1O15259 RPL21P104-201ENST00000464143 478 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.49□□□□□ -1.69
NPHP1O15259 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
NPHP1O15259 RPL7P23-201ENST00000493874 747 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.49□□□□□ -1.69
NPHP1O15259 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.49□□□□□ -1.69
NPHP1O15259 NDUFB4P9-201ENST00000511646 388 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.49□□□□□ -1.69
NPHP1O15259 AC141257.3-201ENST00000572906 215 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.49□□□□□ -1.69
NPHP1O15259 AC004987.4-201ENST00000603383 338 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AL390208.1-201ENST00000605885 644 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AC012531.5-201ENST00000611375 151 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 MIR486-1-201ENST00000612171 68 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 AL590240.3-201ENST00000621416 943 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.49□□□□□ -1.69
NPHP1O15259 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NPHP1O15259 MTND4P34-201ENST00000572715 1371 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NPHP1O15259 AL049781.1-201ENST00000623195 3585 ntBASIC4.49□□□□□ -1.69
NPHP1O15259 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NPHP1O15259 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPHP1O15259 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NPHP1O15259 RNU6-952P-201ENST00000391164 108 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 MTCYBP38-201ENST00000417160 1123 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 AC011742.1-201ENST00000431448 434 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.48□□□□□ -1.69
NPHP1O15259 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.48□□□□□ -1.69
NPHP1O15259 RBMY2UP-201ENST00000453474 324 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 TRBV12-2-201ENST00000489763 344 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.48□□□□□ -1.69
NPHP1O15259 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.48□□□□□ -1.69
NPHP1O15259 SYF2P1-201ENST00000550658 413 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 AC023161.2-201ENST00000551218 780 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.48□□□□□ -1.69
NPHP1O15259 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.48□□□□□ -1.69
NPHP1O15259 SNORD84-203ENST00000584275 78 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 AL158042.1-201ENST00000605338 460 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 AC107952.2-201ENST00000606048 486 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 AL357080.1-201ENST00000617394 239 ntBASIC4.48□□□□□ -1.69
NPHP1O15259 AL596245.1-201ENST00000618994 362 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms