Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.45□□□□□ -2.02
UBFD1O14562 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.45□□□□□ -2.02
UBFD1O14562 NRBF2P5-201ENST00000603087 788 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 AC113368.1-201ENST00000603736 382 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 AL355802.4-201ENST00000607635 548 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 AC245100.7-201ENST00000609678 442 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.45□□□□□ -2.02
UBFD1O14562 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.45□□□□□ -2.02
UBFD1O14562 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
UBFD1O14562 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.45□□□□□ -2.02
UBFD1O14562 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UBFD1O14562 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.44□□□□□ -2.02
UBFD1O14562 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
UBFD1O14562 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
UBFD1O14562 RNU4-82P-201ENST00000362443 140 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 SNORD62.1-201ENST00000362541 86 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 RNU6-629P-201ENST00000384061 103 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.44□□□□□ -2.02
UBFD1O14562 NUP35P1-201ENST00000422734 947 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 AC019097.1-201ENST00000424783 735 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 RPL36P19-201ENST00000430744 301 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.44□□□□□ -2.02
UBFD1O14562 HMGB1P38-201ENST00000490557 577 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.44□□□□□ -2.02
UBFD1O14562 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
UBFD1O14562 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.44□□□□□ -2.02
UBFD1O14562 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.44□□□□□ -2.02
UBFD1O14562 C1DP5-201ENST00000525775 383 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 MTCYBP41-201ENST00000528913 1123 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 AC090616.5-202ENST00000582111 297 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.44□□□□□ -2.02
UBFD1O14562 TPMTP1-201ENST00000592307 737 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.44□□□□□ -2.02
UBFD1O14562 AC091057.2-201ENST00000602594 792 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 AC006023.2-201ENST00000609916 167 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 AL359757.2-201ENST00000624309 274 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 AC079228.1-201ENST00000624774 1049 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
UBFD1O14562 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
UBFD1O14562 AP000526.1-201ENST00000603308 1388 ntBASIC2.44□□□□□ -2.02
UBFD1O14562 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.44□□□□□ -2.02
UBFD1O14562 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
UBFD1O14562 AC104446.1-201ENST00000613728 1321 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
UBFD1O14562 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
UBFD1O14562 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
UBFD1O14562 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
UBFD1O14562 METTL21EP-201ENST00000298105 713 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 RNU6-543P-201ENST00000362576 108 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 RNA5SP456-201ENST00000364002 114 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
UBFD1O14562 AL162578.1-201ENST00000406202 378 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.43□□□□□ -2.02
UBFD1O14562 AC005189.1-201ENST00000431286 310 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.43□□□□□ -2.02
UBFD1O14562 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.43□□□□□ -2.02
UBFD1O14562 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.43□□□□□ -2.02
UBFD1O14562 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.43□□□□□ -2.02
UBFD1O14562 AL513343.1-201ENST00000451818 792 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.43□□□□□ -2.02
UBFD1O14562 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.43□□□□□ -2.02
UBFD1O14562 RPL7L1P13-201ENST00000511702 739 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.43□□□□□ -2.02
UBFD1O14562 AC114781.4-201ENST00000513707 639 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.43□□□□□ -2.02
UBFD1O14562 OR5BN1P-201ENST00000532955 829 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 AADACP1-206ENST00000561502 1193 ntBASIC2.43□□□□□ -2.02
UBFD1O14562 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.43□□□□□ -2.02
UBFD1O14562 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
UBFD1O14562 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.43□□□□□ -2.02
UBFD1O14562 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
UBFD1O14562 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UBFD1O14562 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
UBFD1O14562 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
UBFD1O14562 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UBFD1O14562 AC062016.1-201ENST00000355719 319 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 RNU6-1243P-201ENST00000364028 107 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.42□□□□□ -2.02
UBFD1O14562 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
UBFD1O14562 AL138880.1-201ENST00000405824 642 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 RNU2-52P-201ENST00000410680 190 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 RNU2-71P-201ENST00000411395 189 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.42□□□□□ -2.02
UBFD1O14562 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.42□□□□□ -2.02
UBFD1O14562 MTCO2P17-201ENST00000424336 677 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.42□□□□□ -2.02
UBFD1O14562 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.42□□□□□ -2.02
UBFD1O14562 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.42□□□□□ -2.02
UBFD1O14562 AP000936.2-201ENST00000447151 681 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.42□□□□□ -2.02
UBFD1O14562 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.42□□□□□ -2.02
UBFD1O14562 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.42□□□□□ -2.02
UBFD1O14562 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.42□□□□□ -2.02
UBFD1O14562 TRBV12-1-201ENST00000479785 344 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.42□□□□□ -2.02
UBFD1O14562 AC008565.1-201ENST00000509046 885 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 IGKV2D-36-201ENST00000518643 226 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms