Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL121594.5-201ENST00000631724 573 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 FO624990.1-201ENST00000636373 85 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
SDCBPO00560 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.11□□□□□ -2.07
SDCBPO00560 AC104446.1-201ENST00000613728 1321 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.1□□□□□ -2.07
SDCBPO00560 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.1□□□□□ -2.07
SDCBPO00560 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
SDCBPO00560 AL512646.1-201ENST00000269395 1077 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 RNU6-543P-201ENST00000362576 108 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 RNU6-374P-201ENST00000364146 108 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 SNORD56.5-201ENST00000364281 72 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 RNU1-51P-201ENST00000365345 176 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.1□□□□□ -2.07
SDCBPO00560 MIR483-201ENST00000385070 76 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SDCBPO00560 DSTNP4-201ENST00000399472 474 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 AC129850.1-201ENST00000436203 508 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 CR769767.1-201ENST00000436337 346 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.1□□□□□ -2.07
SDCBPO00560 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.1□□□□□ -2.07
SDCBPO00560 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.1□□□□□ -2.07
SDCBPO00560 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.1□□□□□ -2.07
SDCBPO00560 UBBP3-201ENST00000445497 241 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 AP000936.2-201ENST00000447151 681 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.1□□□□□ -2.07
SDCBPO00560 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.1□□□□□ -2.07
SDCBPO00560 snoU13.4-201ENST00000458916 104 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 GAPDHP39-201ENST00000481866 979 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.1□□□□□ -2.07
SDCBPO00560 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.1□□□□□ -2.07
SDCBPO00560 AC133963.2-201ENST00000513686 578 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.1□□□□□ -2.07
SDCBPO00560 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SDCBPO00560 OR5BN1P-201ENST00000532955 829 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.1□□□□□ -2.07
SDCBPO00560 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.1□□□□□ -2.07
SDCBPO00560 MTCYBP28-201ENST00000566728 1132 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 COX6CP3-201ENST00000580869 223 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 AP001029.3-201ENST00000588063 596 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 AC103881.1-201ENST00000603476 538 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 AL035413.2-201ENST00000604801 525 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.1□□□□□ -2.07
SDCBPO00560 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SDCBPO00560 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SDCBPO00560 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SDCBPO00560 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SDCBPO00560 MTND5P28-201ENST00000438005 1594 ntBASIC2.1□□□□□ -2.07
SDCBPO00560 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SDCBPO00560 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SDCBPO00560 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SDCBPO00560 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
SDCBPO00560 RPS3AP26-201ENST00000398259 784 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 AL139039.1-201ENST00000401900 692 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 RNU2-52P-201ENST00000410680 190 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 BX682237.1-201ENST00000415016 335 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.09□□□□□ -2.07
SDCBPO00560 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.09□□□□□ -2.07
SDCBPO00560 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.09□□□□□ -2.07
SDCBPO00560 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.09□□□□□ -2.07
SDCBPO00560 Z96811.1-201ENST00000445880 108 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 AC015908.1-201ENST00000478739 476 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.09□□□□□ -2.07
SDCBPO00560 AC006445.2-201ENST00000510061 472 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 SETP12-201ENST00000514068 805 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.09□□□□□ -2.07
SDCBPO00560 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.09□□□□□ -2.07
SDCBPO00560 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.09□□□□□ -2.07
SDCBPO00560 AC243972.3-201ENST00000539655 198 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.09□□□□□ -2.07
SDCBPO00560 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.09□□□□□ -2.07
SDCBPO00560 AL391156.1-201ENST00000554965 554 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.09□□□□□ -2.07
SDCBPO00560 AC087481.2-201ENST00000565492 330 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 XIAPP1-201ENST00000603162 600 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 AC113368.1-201ENST00000603736 382 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 AL645944.1-201ENST00000603857 493 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 OR2AS2P-201ENST00000606902 342 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 SNHG22-203ENST00000617833 660 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 VN1R7P-201ENST00000619242 903 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 AL356118.1-201ENST00000635272 1078 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 CRYM-AS1-204ENST00000637983 556 ntBASIC2.09□□□□□ -2.07
SDCBPO00560 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SDCBPO00560 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SDCBPO00560 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SDCBPO00560 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SDCBPO00560 MIR196B-201ENST00000384852 84 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 MIR34A-201ENST00000385130 110 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 Z92545.1-201ENST00000411782 234 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.08□□□□□ -2.08
SDCBPO00560 AC019097.1-201ENST00000424783 735 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 AC063976.3-201ENST00000426849 329 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.08□□□□□ -2.08
SDCBPO00560 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.08□□□□□ -2.08
SDCBPO00560 UBE2V1P6-201ENST00000430840 422 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 SNRPEP4-201ENST00000435815 279 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.08□□□□□ -2.08
SDCBPO00560 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.08□□□□□ -2.08
SDCBPO00560 AC104389.3-201ENST00000445629 235 ntBASIC2.08□□□□□ -2.08
SDCBPO00560 AC068135.1-201ENST00000446164 246 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms