Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGN4O00479 OR6C73P-201ENST00000546432 358 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMGN4O00479 AC009163.5-201ENST00000575421 637 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 SNORD53-201ENST00000579969 78 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGN4O00479 AL713998.2-201ENST00000604538 1198 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMGN4O00479 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
HMGN4O00479 RNU6-301P-201ENST00000384277 107 ntBASIC1.88□□□□□ -2.11
HMGN4O00479 MIR144-201ENST00000384886 86 ntBASIC1.88□□□□□ -2.11
HMGN4O00479 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.88□□□□□ -2.11
HMGN4O00479 LSM5-206ENST00000409987 504 ntTSL 5 BASIC1.88□□□□□ -2.11
HMGN4O00479 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGN4O00479 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGN4O00479 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.88□□□□□ -2.11
HMGN4O00479 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.88□□□□□ -2.11
HMGN4O00479 MIMT1-201ENST00000597105 1050 ntBASIC1.88□□□□□ -2.11
HMGN4O00479 BDH2P1-201ENST00000602288 736 ntBASIC1.88□□□□□ -2.11
HMGN4O00479 AC091057.2-201ENST00000602594 792 ntBASIC1.88□□□□□ -2.11
HMGN4O00479 AL592494.3-201ENST00000609485 464 ntBASIC1.88□□□□□ -2.11
HMGN4O00479 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.88□□□□□ -2.11
HMGN4O00479 RPL23AP61-201ENST00000623642 466 ntBASIC1.88□□□□□ -2.11
HMGN4O00479 AP000676.4-201ENST00000624659 623 ntBASIC1.88□□□□□ -2.11
HMGN4O00479 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HMGN4O00479 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.88□□□□□ -2.11
HMGN4O00479 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HMGN4O00479 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMGN4O00479 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMGN4O00479 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HMGN4O00479 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.87□□□□□ -2.11
HMGN4O00479 SNORA67.3-201ENST00000384366 140 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 SNORA64-201ENST00000384674 134 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMGN4O00479 RN7SKP32-201ENST00000410167 303 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 BTF3P9-201ENST00000418784 283 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGN4O00479 AL590664.1-201ENST00000448065 339 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 NECAP1P2-201ENST00000455668 727 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGN4O00479 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMGN4O00479 AC093755.1-201ENST00000512950 1023 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 AC027309.2-201ENST00000520566 192 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGN4O00479 CENPUP2-201ENST00000555897 1186 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 AADACP1-206ENST00000561502 1193 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 RPS3AP23-202ENST00000574601 686 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 MIR1273D-201ENST00000577266 86 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 MIR4446-201ENST00000578505 67 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGN4O00479 DUXAP4-201ENST00000603046 613 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 AC015849.6-201ENST00000605454 474 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 AP002907.1-201ENST00000606361 1430 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGN4O00479 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 AC091046.2-201ENST00000620775 665 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 SCARNA15.3-201ENST00000626315 122 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 SCARNA4.1-201ENST00000628597 123 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.87□□□□□ -2.11
HMGN4O00479 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMGN4O00479 OR56A5-201ENST00000340110 738 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 RNU1-109P-201ENST00000383960 147 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
HMGN4O00479 AL135786.1-201ENST00000415892 214 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 AC244098.2-201ENST00000422068 99 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGN4O00479 MYL8P-204ENST00000431574 518 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGN4O00479 RPL23AP58-201ENST00000440453 469 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 XKRYP6-201ENST00000440468 1116 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 XKRYP3-201ENST00000442113 1116 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 EEF1B2P7-201ENST00000451177 676 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGN4O00479 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGN4O00479 LARP7P4-201ENST00000481075 878 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGN4O00479 RPL9P6-201ENST00000492764 598 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGN4O00479 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.86□□□□□ -2.11
HMGN4O00479 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGN4O00479 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HMGN4O00479 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGN4O00479 AF131215.7-201ENST00000602443 707 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 AC113194.1-201ENST00000606037 500 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGN4O00479 AC007620.3-201ENST00000608131 497 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 AC103710.1-201ENST00000610003 901 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 AC245517.5-201ENST00000611529 162 ntBASIC1.86□□□□□ -2.11
HMGN4O00479 AC009487.4-201ENST00000624969 3585 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 MIR449A-201ENST00000362113 91 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HMGN4O00479 RPS3AP26-201ENST00000398259 784 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGN4O00479 Z98742.3-201ENST00000418637 326 ntBASIC1.85□□□□□ -2.11
HMGN4O00479 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGN4O00479 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGN4O00479 ARL5AP2-201ENST00000444698 533 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms