Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.67□□□□□ -1.82
O00370 AP000776.1-201ENST00000530032 1663 ntBASIC3.67□□□□□ -1.82
O00370 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
O00370 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
O00370 AL021368.2-201ENST00000606125 5352 ntBASIC3.67□□□□□ -1.82
O00370 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
O00370 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.67□□□□□ -1.82
O00370 AC005539.1-201ENST00000443768 1479 ntBASIC3.67□□□□□ -1.82
O00370 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.66□□□□□ -1.82
O00370 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
O00370 AC138915.3-201ENST00000562908 1389 ntBASIC3.66□□□□□ -1.82
O00370 AC032011.1-201ENST00000611703 1549 ntBASIC3.66□□□□□ -1.82
O00370 AL645937.1-201ENST00000641739 1652 ntBASIC3.66□□□□□ -1.82
O00370 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
O00370 RNU6-50P-201ENST00000362356 103 ntBASIC3.66□□□□□ -1.82
O00370 RNU4-35P-201ENST00000362588 141 ntBASIC3.66□□□□□ -1.82
O00370 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
O00370 RNU6-339P-201ENST00000384310 107 ntBASIC3.66□□□□□ -1.82
O00370 MIR449B-201ENST00000384995 97 ntBASIC3.66□□□□□ -1.82
O00370 AC016769.3-201ENST00000396562 315 ntBASIC3.66□□□□□ -1.82
O00370 EI24P2-201ENST00000397776 1076 ntBASIC3.66□□□□□ -1.82
O00370 RN7SKP111-201ENST00000410349 271 ntBASIC3.66□□□□□ -1.82
O00370 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.66□□□□□ -1.82
O00370 AC245052.5-201ENST00000416320 649 ntBASIC3.66□□□□□ -1.82
O00370 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
O00370 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.66□□□□□ -1.82
O00370 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.66□□□□□ -1.82
O00370 TRBV26-201ENST00000456572 344 ntBASIC3.66□□□□□ -1.82
O00370 snoU13.24-201ENST00000458998 104 ntBASIC3.66□□□□□ -1.82
O00370 RPS27P29-201ENST00000463110 252 ntBASIC3.66□□□□□ -1.82
O00370 AC068587.2-201ENST00000478386 781 ntBASIC3.66□□□□□ -1.82
O00370 AP000563.1-201ENST00000490865 758 ntBASIC3.66□□□□□ -1.82
O00370 PHBP14-201ENST00000512887 367 ntBASIC3.66□□□□□ -1.82
O00370 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.66□□□□□ -1.82
O00370 MIR2276-201ENST00000516886 89 ntBASIC3.66□□□□□ -1.82
O00370 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
O00370 AC007458.1-201ENST00000542812 373 ntBASIC3.66□□□□□ -1.82
O00370 AC023050.2-201ENST00000544968 387 ntBASIC3.66□□□□□ -1.82
O00370 AC090888.2-201ENST00000559765 1144 ntBASIC3.66□□□□□ -1.82
O00370 AL353778.1-201ENST00000603149 408 ntBASIC3.66□□□□□ -1.82
O00370 AL139344.1-201ENST00000605228 195 ntBASIC3.66□□□□□ -1.82
O00370 U3.45-201ENST00000607547 219 ntBASIC3.66□□□□□ -1.82
O00370 AC091304.6-201ENST00000619761 202 ntBASIC3.66□□□□□ -1.82
O00370 AC092650.2-201ENST00000619984 902 ntBASIC3.66□□□□□ -1.82
O00370 AC018816.2-201ENST00000621460 353 ntBASIC3.66□□□□□ -1.82
O00370 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.66□□□□□ -1.82
O00370 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
O00370 AL672296.1-201ENST00000427780 2158 ntBASIC3.66□□□□□ -1.82
O00370 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
O00370 AF117829.1-206ENST00000621883 3802 ntBASIC3.65□□□□□ -1.82
O00370 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
O00370 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
O00370 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.65□□□□□ -1.82
O00370 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.65□□□□□ -1.83
O00370 RNA5SP295-201ENST00000362655 121 ntBASIC3.65□□□□□ -1.83
O00370 DEFB109C-201ENST00000382575 264 ntBASIC3.65□□□□□ -1.83
O00370 DEFB109B-201ENST00000382656 264 ntBASIC3.65□□□□□ -1.83
O00370 AL450338.1-201ENST00000407987 512 ntBASIC3.65□□□□□ -1.83
O00370 MTCO3P12-201ENST00000416718 547 ntBASIC3.65□□□□□ -1.83
O00370 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.65□□□□□ -1.83
O00370 AC069157.1-201ENST00000421749 137 ntBASIC3.65□□□□□ -1.83
O00370 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.65□□□□□ -1.83
O00370 GLRXP1-201ENST00000423261 334 ntBASIC3.65□□□□□ -1.83
O00370 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.65□□□□□ -1.83
O00370 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.65□□□□□ -1.83
O00370 MTND1P31-201ENST00000449206 961 ntBASIC3.65□□□□□ -1.83
O00370 AC021205.2-201ENST00000480069 347 ntBASIC3.65□□□□□ -1.83
O00370 AL024509.2-201ENST00000493462 493 ntBASIC3.65□□□□□ -1.83
O00370 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.65□□□□□ -1.83
O00370 HMGB1P22-201ENST00000505315 124 ntBASIC3.65□□□□□ -1.83
O00370 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.65□□□□□ -1.83
O00370 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
O00370 AC093281.2-201ENST00000510153 597 ntBASIC3.65□□□□□ -1.83
O00370 AC026412.2-201ENST00000512270 1075 ntBASIC3.65□□□□□ -1.83
O00370 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.65□□□□□ -1.83
O00370 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.65□□□□□ -1.83
O00370 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
O00370 AC004024.1-201ENST00000549244 247 ntBASIC3.65□□□□□ -1.83
O00370 CCNG2P1-201ENST00000549521 1000 ntBASIC3.65□□□□□ -1.83
O00370 ZNF321P-202ENST00000550843 495 ntBASIC3.65□□□□□ -1.83
O00370 DUXAP1-201ENST00000556632 463 ntBASIC3.65□□□□□ -1.83
O00370 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.65□□□□□ -1.83
O00370 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.65□□□□□ -1.83
O00370 AC009712.1-201ENST00000564938 316 ntBASIC3.65□□□□□ -1.83
O00370 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.65□□□□□ -1.83
O00370 LARP7P2-201ENST00000575306 125 ntBASIC3.65□□□□□ -1.83
O00370 AC008507.1-201ENST00000587506 734 ntBASIC3.65□□□□□ -1.83
O00370 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.65□□□□□ -1.83
O00370 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.65□□□□□ -1.83
O00370 AC024220.1-201ENST00000603675 484 ntBASIC3.65□□□□□ -1.83
O00370 AL159169.3-201ENST00000608871 561 ntBASIC3.65□□□□□ -1.83
O00370 AC008083.4-201ENST00000615076 444 ntBASIC3.65□□□□□ -1.83
O00370 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.65□□□□□ -1.83
O00370 PLCE1P1-201ENST00000622094 305 ntBASIC3.65□□□□□ -1.83
O00370 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.65□□□□□ -1.83
O00370 AC007490.1-201ENST00000624321 703 ntBASIC3.65□□□□□ -1.83
O00370 AC120349.3-201ENST00000624377 529 ntBASIC3.65□□□□□ -1.83
O00370 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
O00370 AL356274.2-201ENST00000624379 3752 ntBASIC3.65□□□□□ -1.83
O00370 ZNF542P-204ENST00000482727 1305 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms