Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RN7SKP53-201ENST00000411337 315 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.24□□□□□ -1.89
PDLIM1O00151 AL356968.1-201ENST00000416622 474 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 MTCO3P12-201ENST00000416718 547 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AL356320.2-201ENST00000417263 507 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AL513175.2-201ENST00000422071 443 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AL590103.1-201ENST00000434488 307 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC092427.1-201ENST00000439177 601 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.24□□□□□ -1.89
PDLIM1O00151 RPL23AP76-201ENST00000441860 458 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 Z95327.1-201ENST00000446082 482 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 snoU13.3-201ENST00000459441 104 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 RPL7P15-201ENST00000461190 712 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM1O00151 AL024509.2-201ENST00000493462 493 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC134050.1-201ENST00000495088 933 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.24□□□□□ -1.89
PDLIM1O00151 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.24□□□□□ -1.89
PDLIM1O00151 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM1O00151 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.24□□□□□ -1.89
PDLIM1O00151 AC008837.2-201ENST00000513076 418 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 RNU1-143P-201ENST00000516296 146 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC107934.2-201ENST00000518653 310 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 RANP9-201ENST00000519957 271 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.24□□□□□ -1.89
PDLIM1O00151 AC005832.3-201ENST00000537929 631 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.24□□□□□ -1.89
PDLIM1O00151 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.24□□□□□ -1.89
PDLIM1O00151 GTF2IP22-201ENST00000554443 182 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC023813.2-201ENST00000564321 469 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.24□□□□□ -1.89
PDLIM1O00151 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.24□□□□□ -1.89
PDLIM1O00151 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.24□□□□□ -1.89
PDLIM1O00151 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.24□□□□□ -1.89
PDLIM1O00151 BNIP3P26-201ENST00000600827 554 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 MTND3P19-201ENST00000603825 345 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 U1.23-201ENST00000610293 146 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 RNU1-68P-201ENST00000615382 146 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC006133.1-201ENST00000617106 264 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.24□□□□□ -1.89
PDLIM1O00151 U1.39-201ENST00000621562 146 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PDLIM1O00151 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM1O00151 AC099786.3-201ENST00000565735 1410 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 NUP58P1-201ENST00000502546 1738 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.24□□□□□ -1.89
PDLIM1O00151 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM1O00151 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM1O00151 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM1O00151 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM1O00151 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM1O00151 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM1O00151 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.23□□□□□ -1.89
PDLIM1O00151 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PDLIM1O00151 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM1O00151 PTMAP2-201ENST00000397627 327 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 TOMM22P1-201ENST00000418578 312 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AL035423.1-201ENST00000420331 213 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM1O00151 AC109583.1-201ENST00000432156 268 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM1O00151 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM1O00151 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM1O00151 MTCYBP11-201ENST00000447254 1109 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 GSTA11P-201ENST00000452866 669 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 HMGB1P15-201ENST00000453854 435 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM1O00151 AC010285.1-201ENST00000470580 392 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AP002812.1-201ENST00000495378 474 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM1O00151 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM1O00151 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM1O00151 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.23□□□□□ -1.89
PDLIM1O00151 AC026412.2-201ENST00000512270 1075 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM1O00151 RN7SKP31-201ENST00000516354 278 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AC026403.1-201ENST00000518938 295 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 OR4P1P-201ENST00000530808 1136 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.23□□□□□ -1.89
PDLIM1O00151 LARP7P2-201ENST00000575306 125 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AP001029.3-201ENST00000588063 596 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AC020914.6-201ENST00000594327 272 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AC103881.1-201ENST00000603476 538 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AC106052.1-201ENST00000608029 497 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AC004696.1-201ENST00000614345 607 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AC040168.1-201ENST00000623594 991 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.23□□□□□ -1.89
PDLIM1O00151 MIR6733-201ENST00000635723 61 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 U6.101-201ENST00000637707 76 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AL136164.4-201ENST00000625013 2135 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 AL356274.2-201ENST00000624379 3752 ntBASIC3.23□□□□□ -1.89
PDLIM1O00151 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDLIM1O00151 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PDLIM1O00151 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.22□□□□□ -1.89
PDLIM1O00151 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.22□□□□□ -1.89
PDLIM1O00151 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDLIM1O00151 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PDLIM1O00151 RNA5SP258-201ENST00000362750 119 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 RNU6-1249P-201ENST00000363237 111 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 SNORA72.3-201ENST00000365074 132 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms