Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC034244.1-201ENST00000507687 207 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 AC239860.2-201ENST00000525886 270 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC188H7C350 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC188H7C350 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC188H7C350 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC188H7C350 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC188H7C350 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC188H7C350 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC188H7C350 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC188H7C350 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC188H7C350 AC006539.2-201ENST00000601729 572 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 AC234772.3-201ENST00000602277 528 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 AC011468.4-201ENST00000603942 409 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 AL109618.2-201ENST00000605527 211 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 AC103710.3-201ENST00000608157 948 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC188H7C350 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC188H7C350 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC188H7C350 MTCO1P9-201ENST00000505577 1534 ntBASIC3.59□□□□□ -1.84
CCDC188H7C350 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC188H7C350 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC188H7C350 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC188H7C350 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC188H7C350 SNORD56.3-201ENST00000363507 71 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 RNA5SP515-201ENST00000364570 118 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 RNU6-83P-201ENST00000384568 112 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 MIR23A-201ENST00000385245 73 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 SNORA48.7-201ENST00000391302 135 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 HMGB3P23-201ENST00000414981 585 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AC017079.2-201ENST00000416102 485 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC188H7C350 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC188H7C350 DUTP6-201ENST00000425573 462 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 MTCYBP45-201ENST00000435243 565 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC188H7C350 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC188H7C350 AC002381.1-201ENST00000447049 280 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AL359073.1-201ENST00000448036 403 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC188H7C350 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC188H7C350 KCTD9P5-201ENST00000504141 1170 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AC068657.1-201ENST00000520807 306 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC188H7C350 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC188H7C350 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC188H7C350 AC067959.1-201ENST00000604334 379 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AL022099.1-201ENST00000604551 712 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC188H7C350 AL391497.1-201ENST00000608671 547 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AC092106.3-201ENST00000611308 722 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AC024941.1-201ENST00000612250 334 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AL392048.1-201ENST00000613946 534 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 AC018816.2-201ENST00000621460 353 ntBASIC3.58□□□□□ -1.84
CCDC188H7C350 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC188H7C350 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC188H7C350 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC188H7C350 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC188H7C350 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC188H7C350 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC188H7C350 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC188H7C350 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCDC188H7C350 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC188H7C350 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC188H7C350 RNU6-1155P-201ENST00000363554 107 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 RPL32P23-201ENST00000397237 405 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 RPS3AP25-201ENST00000411660 793 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CCDC188H7C350 MTCYBP38-201ENST00000417160 1123 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 AC083875.1-201ENST00000419509 405 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 ZYG11AP1-201ENST00000430329 837 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC188H7C350 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC188H7C350 HMGB3P11-201ENST00000440127 604 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 AL591719.1-201ENST00000444669 744 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 Z73417.1-201ENST00000447373 778 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC188H7C350 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC188H7C350 CFTRP1-201ENST00000456646 183 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 HMGN2P16-201ENST00000456802 261 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 RPS23P3-201ENST00000470993 430 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC188H7C350 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC188H7C350 AC114967.1-201ENST00000504890 259 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 AC021146.8-201ENST00000507455 733 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC188H7C350 MTCYBP43-201ENST00000513621 740 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC188H7C350 RN7SKP265-201ENST00000516448 223 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 RNU5A-4P-201ENST00000516588 111 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC188H7C350 AP001804.3-201ENST00000525146 880 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 MTCO2P15-201ENST00000532655 656 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC188H7C350 AC087465.1-201ENST00000560574 245 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 MIR4760-201ENST00000585040 80 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC188H7C350 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC188H7C350 AL031281.1-201ENST00000604049 488 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms