Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC007256.1-201ENST00000392253 2765 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC111188.2-201ENST00000529697 1387 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 OR1L1-202ENST00000373686 1083 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 SNORA54-201ENST00000384281 123 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNU2-21P-201ENST00000410368 188 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC004022.2-201ENST00000413824 193 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 BMS1P22-201ENST00000414726 313 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC009237.2-201ENST00000421358 284 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL513175.1-201ENST00000431492 780 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 ARPC3P2-201ENST00000457786 533 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 RN7SL499P-201ENST00000481141 276 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC096571.1-202ENST00000506634 735 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC111000.2-201ENST00000507775 550 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC104108.1-201ENST00000509930 412 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNU6-415P-201ENST00000516252 97 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNU6-1028P-201ENST00000517164 93 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC091163.3-201ENST00000518269 1144 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC010376.1-201ENST00000522101 334 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 GTF3AP2-201ENST00000557014 266 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC010928.3-201ENST00000587712 541 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC078899.3-201ENST00000599065 212 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC091488.1-201ENST00000604239 660 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL033523.1-201ENST00000605153 153 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC006023.2-201ENST00000609916 167 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNU6-1192P-201ENST00000612197 107 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC016597.2-201ENST00000613256 341 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNU6-489P-201ENST00000618289 107 ntBASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.91□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL355596.1-201ENST00000565399 3996 ntBASIC2.9□□□□□ -1.94
TMX2-CTNND1H3BSU7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
TMX2-CTNND1H3BSU7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNU6-1293P-201ENST00000384077 107 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 MIR607-201ENST00000385241 96 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 SAR1AP2-201ENST00000392696 594 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC110754.1-201ENST00000399740 601 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTCO1P56-201ENST00000401674 224 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 RPL23AP47-201ENST00000408017 460 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 RN7SKP58-201ENST00000411010 305 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 RPS12P18-201ENST00000442381 270 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 RPS24P13-201ENST00000442520 397 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC113420.1-201ENST00000507903 571 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 NIFKP8-201ENST00000560500 874 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC055876.1-202ENST00000567053 138 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC090312.2-201ENST00000582687 378 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC083760.1-201ENST00000589621 670 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC008687.2-201ENST00000597865 520 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNU6-156P-201ENST00000621869 107 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTCO1P24-201ENST00000515438 1558 ntBASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TMX2-CTNND1H3BSU7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 NACA3P-201ENST00000359690 648 ntBASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNA5SP391-201ENST00000363456 119 ntBASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL590004.2-201ENST00000404787 371 ntBASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 OR51A3P-201ENST00000413596 924 ntBASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 EI24P1-201ENST00000416584 867 ntBASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL645937.1-202ENST00000421799 937 ntBASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTCO2P23-201ENST00000425216 680 ntBASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.89□□□□□ -1.95
TMX2-CTNND1H3BSU7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms