Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 RNU6-263P-201ENST00000363811 107 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 RNY1P12-201ENST00000364251 105 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 Y_RNA.453-201ENST00000384223 109 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 RN7SKP285-201ENST00000410137 318 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 RPS15AP12-201ENST00000419498 388 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 OR1AA1P-201ENST00000419597 916 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AL353193.1-201ENST00000421444 268 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AL645608.4-201ENST00000423619 154 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 RPS17P8-201ENST00000434525 335 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 RPL7P23-201ENST00000493874 747 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 FCF1P3-201ENST00000496394 590 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 IGBP1P4-201ENST00000503202 879 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC008694.2-201ENST00000517591 306 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 TVP23BP1-201ENST00000557500 617 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AL133153.1-201ENST00000557756 303 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 HMGB3P26-201ENST00000560051 582 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC025678.1-201ENST00000567861 338 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 RN7SL600P-201ENST00000581811 299 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC105224.1-201ENST00000587055 421 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 IGHV3-29-201ENST00000604817 344 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 RNU4-89P-201ENST00000607443 133 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC103710.2-201ENST00000609912 942 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC002553.4-201ENST00000616896 331 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AL008636.1-201ENST00000625038 1018 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC104623.2-202ENST00000623477 4002 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 CR848007.1-201ENST00000442354 1699 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC116667.1-201ENST00000604855 2072 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC006971.1-201ENST00000407916 4486 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC073136.1-201ENST00000449426 2884 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 RNU1-83P-201ENST00000363426 164 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 RNA5SP130-201ENST00000364431 114 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 Y_RNA.573-201ENST00000384763 105 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 RNU6-754P-201ENST00000391166 107 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 MTATP6P18-201ENST00000417994 673 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 ELOCP4-201ENST00000420090 333 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC007283.2-201ENST00000424739 197 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 GPR143P-201ENST00000434155 205 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 RPL35AP22-201ENST00000436855 335 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 RPL12P18-201ENST00000437175 325 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AP001486.1-201ENST00000463339 476 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC074250.1-201ENST00000511117 192 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 FTH1P9-201ENST00000513251 355 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 RNU6-1095P-201ENST00000516148 108 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AL512360.1-201ENST00000555346 234 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AP005205.1-201ENST00000563503 508 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC006272.2-201ENST00000594725 163 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AL031176.1-201ENST00000604554 466 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 MIR6130-201ENST00000619419 109 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC006065.5-201ENST00000623427 349 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 RLIMP1-201ENST00000339626 1680 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms