Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SNORA11.4-201ENST00000408823 129 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 AL136380.1-201ENST00000447970 162 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 AL139109.1-201ENST00000455491 297 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 BX510359.1-201ENST00000456973 237 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 MTCYBP41-201ENST00000528913 1123 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 OR6C73P-201ENST00000546432 358 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 MTND2P13-201ENST00000577438 1039 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 SNRPGP15-201ENST00000600149 222 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 AP004247.3-201ENST00000608682 624 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
LINC01549A6NIU2 ZNF355P-201ENST00000427301 3216 ntBASIC1.4□□□□□ -2.18
LINC01549A6NIU2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 RNA5SP139-201ENST00000364340 117 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 RNU6-7-201ENST00000364784 107 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 RNU6-234P-201ENST00000365229 104 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 RNU6-8-201ENST00000365467 107 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 OR13C3-201ENST00000374781 1108 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AL450338.1-201ENST00000407987 512 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 RNU2-52P-201ENST00000410680 190 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AC013268.2-201ENST00000420753 337 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 YME1L1P1-201ENST00000429435 297 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 SDCBPP1-201ENST00000440192 890 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 RPL5P24-201ENST00000463742 885 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 SNORA67.7-201ENST00000516664 135 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AP005435.4-201ENST00000529514 284 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 MIR3618-201ENST00000580330 88 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AL020997.2-201ENST00000602607 184 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AL356280.1-201ENST00000603614 379 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 MIR6748-201ENST00000610433 71 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 MIR6075-201ENST00000620782 95 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AC025034.2-201ENST00000623264 286 ntBASIC1.4□□□□□ -2.19
LINC01549A6NIU2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LINC01549A6NIU2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 OR5J1P-201ENST00000313544 939 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 SET-203ENST00000372688 801 ntTSL 2 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 ATF1P1-201ENST00000406040 927 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AL357078.2-201ENST00000416486 427 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 RPL21P66-201ENST00000426566 466 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 RPL23AP83-201ENST00000434984 473 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 SNRPEP4-201ENST00000435815 279 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC000041.1-201ENST00000439655 175 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC078857.1-201ENST00000469870 667 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 RN7SL432P-201ENST00000484057 298 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC107393.1-201ENST00000512403 346 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC006499.2-201ENST00000513470 337 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC108471.1-201ENST00000513977 287 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 HSPE1P3-201ENST00000559254 309 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC034105.4-201ENST00000568304 277 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC090616.5-202ENST00000582111 297 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 MIR4658-201ENST00000584344 65 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 NUTF2P8-201ENST00000604593 363 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AP004372.1-201ENST00000604842 844 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AL161912.3-201ENST00000605404 628 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 AC008962.1-201ENST00000605729 304 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms