Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RPL23AP78-201ENST00000599928 470 ntBASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 AC034229.2-201ENST00000566945 2508 ntBASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 AC110373.1-201ENST00000505994 3505 ntBASIC6.36□□□□□ -1.39
VPS9D1Q9Y2B5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 DDX10P1-201ENST00000448545 1933 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 MIR410-201ENST00000362222 80 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RNU6-1301P-201ENST00000362724 104 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RNU6-755P-201ENST00000364400 103 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RN7SKP237-201ENST00000364663 301 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RNU11-4P-201ENST00000391149 133 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 MIR1302-4-201ENST00000408701 150 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RN7SKP114-201ENST00000410327 279 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RN7SKP281-201ENST00000410472 352 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC011742.1-201ENST00000431448 434 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC083855.1-201ENST00000440041 258 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC010655.1-201ENST00000449336 292 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC234775.1-201ENST00000454247 670 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RN7SL790P-201ENST00000474043 298 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RN7SL502P-201ENST00000481857 290 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RN7SL612P-201ENST00000497704 295 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC108043.1-201ENST00000512696 574 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 RNU7-175P-201ENST00000515915 61 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC004852.3-201ENST00000614131 326 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 AC024255.1-201ENST00000614376 102 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 MIR6849-201ENST00000618543 69 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 MIR6503-201ENST00000622884 86 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 MAPK10-287ENST00000641217 3037 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 PANDAR-201ENST00000629595 1506 ntBASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS9D1Q9Y2B5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AC009951.1-201ENST00000623674 2614 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 RNU4-56P-201ENST00000364700 142 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 Y_RNA.563-201ENST00000384707 108 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 MIR578-201ENST00000384828 96 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 ARSFP1-201ENST00000398758 477 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 RNU4-64P-201ENST00000410795 131 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 CYCSP43-201ENST00000438233 310 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AC079354.2-201ENST00000453523 154 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AC034236.1-201ENST00000469891 373 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AC022795.1-201ENST00000473808 480 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 RPS26P21-201ENST00000475397 348 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 RPS27AP9-201ENST00000477681 438 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 RNU6-390P-201ENST00000516259 103 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 RNU7-110P-201ENST00000516891 62 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 RPL21P9-201ENST00000556149 474 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 OR1F2P-201ENST00000570470 933 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AC090617.3-201ENST00000573670 475 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 RN7SL652P-201ENST00000577769 300 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 MIR15A-201ENST00000607334 83 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 AC099506.2-201ENST00000623074 221 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 CYP4F35P-202ENST00000636121 390 ntBASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS9D1Q9Y2B5 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms