Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF6Q9Y252 MTND5P27-201ENST00000428871 1720 ntBASIC3.18□□□□□ -1.9
RNF6Q9Y252 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF6Q9Y252 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF6Q9Y252 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF6Q9Y252 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF6Q9Y252 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AL049780.3-201ENST00000624612 1583 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 AL672296.1-201ENST00000427780 2158 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF6Q9Y252 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF6Q9Y252 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF6Q9Y252 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 RNU4-35P-201ENST00000362588 141 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 RNU4-51P-201ENST00000364206 140 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 DBIP2-201ENST00000419076 262 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC005326.1-201ENST00000429197 123 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 ISCA1P2-201ENST00000438679 421 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 RABEPKP1-201ENST00000440529 1026 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 RPL39P6-201ENST00000448289 150 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 MTND2P19-201ENST00000449129 1012 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC113347.3-201ENST00000509113 148 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC010374.2-201ENST00000512933 535 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 RNU6-1225P-201ENST00000516336 65 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 MAGOH2P-202ENST00000584384 429 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 BNIP3P24-201ENST00000593398 557 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 VN1R83P-201ENST00000595685 445 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 AL590240.3-201ENST00000621416 943 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC073348.1-201ENST00000623002 331 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF6Q9Y252 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF6Q9Y252 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF6Q9Y252 AC109315.1-201ENST00000584143 1347 ntBASIC3.17□□□□□ -1.9
RNF6Q9Y252 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RNF6Q9Y252 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF6Q9Y252 SNRPEP3-201ENST00000338402 276 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 RNU5E-10P-201ENST00000363506 118 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF6Q9Y252 Y_RNA.472-201ENST00000384322 102 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 MIR506-201ENST00000384998 124 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 SNORA40.2-201ENST00000390847 128 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 HSFY4P-201ENST00000415994 1181 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AL356968.1-201ENST00000416622 474 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 OR1AA1P-201ENST00000419597 916 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AL354692.1-201ENST00000423044 315 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 NEK4P1-201ENST00000433383 879 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 AL591503.2-201ENST00000442314 1005 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 OFD1P3Y-201ENST00000453312 783 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC023598.1-201ENST00000472521 361 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 KLHL2P1-201ENST00000508691 521 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 MTCYBP16-201ENST00000509187 1129 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 GMPSP1-201ENST00000514075 579 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 RNA5SP468-201ENST00000516782 93 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 SNRPGP16-201ENST00000533275 226 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 UBE2NP1-201ENST00000545592 458 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC125611.1-201ENST00000549563 229 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 RPL23AP92-201ENST00000603609 255 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC010738.1-201ENST00000604970 987 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC024257.5-201ENST00000612739 531 ntBASIC3.16□□□□□ -1.9
RNF6Q9Y252 AC104763.3-201ENST00000613765 618 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms