Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MIR3074-201ENST00000384885 81 ntBASIC2.05□□□□□ -2.08
CHD7Q9P2D1 HMGB1P31-201ENST00000437242 427 ntBASIC2.05□□□□□ -2.08
CHD7Q9P2D1 AC140059.1-201ENST00000489238 361 ntBASIC2.05□□□□□ -2.08
CHD7Q9P2D1 AL445685.2-201ENST00000422551 342 ntBASIC2.05□□□□□ -2.08
CHD7Q9P2D1 RPS29P12-201ENST00000460178 152 ntBASIC2.05□□□□□ -2.08
CHD7Q9P2D1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.05□□□□□ -2.08
CHD7Q9P2D1 AC087468.1-201ENST00000604365 630 ntBASIC2.05□□□□□ -2.08
CHD7Q9P2D1 BX248123.2-201ENST00000606318 124 ntBASIC2.05□□□□□ -2.08
CHD7Q9P2D1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHD7Q9P2D1 XPOTP1-201ENST00000443317 2398 ntBASIC2.05□□□□□ -2.08
CHD7Q9P2D1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHD7Q9P2D1 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 RNA5SP325-201ENST00000363756 130 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 RNU6-707P-201ENST00000364647 95 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AC019129.1-201ENST00000403786 261 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 RPS7P5-201ENST00000441482 581 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AC245517.2-201ENST00000442890 346 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 RPL12P25-201ENST00000455592 494 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AP000852.1-201ENST00000472460 573 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 TTC39CP1-201ENST00000512513 755 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AC117532.1-201ENST00000514638 323 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 RN7SKP234-201ENST00000517173 224 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 HMGB1P1-201ENST00000522557 636 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 RFPL1S-203ENST00000539579 330 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AL356280.1-201ENST00000603614 379 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AL160237.3-201ENST00000604114 1013 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AC011978.2-201ENST00000569835 2054 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 RNY1P14-201ENST00000384426 108 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AC073136.2-201ENST00000417282 849 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AL590762.3-201ENST00000436372 640 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 SDR42E1P3-201ENST00000438345 502 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 MIR5089-201ENST00000580047 84 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 BMS1P7-201ENST00000602440 1052 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AC095050.2-201ENST00000510748 1458 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 Y_RNA.374-201ENST00000365606 101 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 HSPD1P16-201ENST00000402302 394 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD7Q9P2D1 AC025260.1-201ENST00000548858 430 ntBASIC2.04□□□□□ -2.08
CHD7Q9P2D1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 RPL23AP39-201ENST00000415533 405 ntBASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 SEPT7P3-201ENST00000455017 621 ntBASIC2.03□□□□□ -2.08
CHD7Q9P2D1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AP006248.2-201ENST00000623309 592 ntBASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AC244517.12-201ENST00000623581 663 ntBASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AC084035.1-201ENST00000634543 607 ntBASIC2.03□□□□□ -2.08
CHD7Q9P2D1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AL590084.1-201ENST00000407885 387 ntBASIC2.03□□□□□ -2.08
CHD7Q9P2D1 POLR2J4-204ENST00000418424 324 ntBASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 IPMKP1-201ENST00000425988 855 ntBASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AL591719.1-201ENST00000444669 744 ntBASIC2.03□□□□□ -2.08
CHD7Q9P2D1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.03□□□□□ -2.08
CHD7Q9P2D1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHD7Q9P2D1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AC010680.1-201ENST00000590024 3590 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AC234782.4-201ENST00000417646 1048 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 RPS7P2-201ENST00000435134 607 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 USP9YP8-201ENST00000441913 500 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 GZMAP1-201ENST00000503054 631 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.02□□□□□ -2.09
CHD7Q9P2D1 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AC084768.2-201ENST00000622736 221 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AL606537.1-201ENST00000607258 2011 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHD7Q9P2D1 MIR1294-201ENST00000408503 142 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 EXTL2P1-201ENST00000446218 416 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.02□□□□□ -2.09
CHD7Q9P2D1 MIR449C-201ENST00000516047 92 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.02□□□□□ -2.09
CHD7Q9P2D1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 AC068790.3-201ENST00000602988 553 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 RPAP2P1-201ENST00000603626 1168 ntBASIC2.02□□□□□ -2.09
CHD7Q9P2D1 APOOP1-201ENST00000604695 592 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms