Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 RPS29P10-201ENST00000439197 166 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 CEACAMP7-201ENST00000444105 496 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AL035666.1-201ENST00000446195 348 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC090804.1-201ENST00000448870 490 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 MTND1P17-201ENST00000448961 204 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC097484.1-201ENST00000471148 389 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 RN7SL814P-201ENST00000487715 300 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC106872.2-201ENST00000494303 480 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 SNORD116-26-201ENST00000516006 96 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 HMGB1P19-201ENST00000517578 577 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 OR11H5P-201ENST00000554039 926 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC110588.1-201ENST00000559699 137 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC024619.4-201ENST00000580924 316 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC092747.3-201ENST00000603769 301 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AL670379.11-201ENST00000604059 253 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AL670379.10-201ENST00000604330 253 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC011626.1-201ENST00000604710 562 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AL670379.12-201ENST00000605291 253 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AL670379.9-201ENST00000605428 253 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC098657.3-201ENST00000620434 263 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AP002799.1-201ENST00000623552 423 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC022418.1-201ENST00000624118 445 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 ASNSP1-201ENST00000518311 1939 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTN3Q9P232 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTN3Q9P232 AC009951.1-201ENST00000623674 2614 ntBASIC5.63□□□□□ -1.51
CNTN3Q9P232 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTN3Q9P232 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTN3Q9P232 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CNTN3Q9P232 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTN3Q9P232 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 RNU6-1252P-201ENST00000363054 104 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 RNU6-593P-201ENST00000364716 112 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 RNU6-61P-201ENST00000365528 109 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 UBE2V1P2-201ENST00000397758 440 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 RPS12P24-201ENST00000412619 387 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 DDX39BP1-205ENST00000422507 192 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 RPL7P46-201ENST00000425129 740 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 SKA2P1-201ENST00000425592 390 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 CALM2P2-201ENST00000428512 440 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC005019.1-201ENST00000436455 431 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 PSMD10P3-201ENST00000437000 448 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC010733.1-201ENST00000451515 401 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 RPS20P21-201ENST00000466859 343 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 RPL7P43-201ENST00000478876 753 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 RN7SL826P-201ENST00000479724 288 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC104806.1-201ENST00000508720 308 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 RNU6-1137P-201ENST00000517073 99 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 RNU6-64P-201ENST00000517119 105 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC107918.3-201ENST00000533272 382 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 AL133271.1-201ENST00000538229 291 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC138761.3-201ENST00000579993 334 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC012443.1-201ENST00000605605 231 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 AC012409.4-201ENST00000612923 249 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 AL136313.1-201ENST00000624804 202 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 MTND4P1-201ENST00000457501 1466 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 TPTE2P4-201ENST00000258589 1605 ntBASIC5.62□□□□□ -1.51
CNTN3Q9P232 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CNTN3Q9P232 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTN3Q9P232 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms