Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AL161431.1-201ENST00000618966 4205 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 RNU6-207P-201ENST00000384137 107 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 MIR490-201ENST00000384865 128 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 MIR554-201ENST00000384874 96 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 SNORD67-201ENST00000390833 111 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 TAF9BP1-201ENST00000396646 746 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 FAT1P1-201ENST00000406588 507 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 U3.42-201ENST00000408746 214 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 RNU2-28P-201ENST00000410457 189 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 RNU2-15P-201ENST00000410692 191 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 SSXP9-201ENST00000417503 292 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 BOLA3P4-201ENST00000418151 400 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 RPF2P1-201ENST00000424137 906 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC091286.1-201ENST00000431233 461 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AL096829.2-201ENST00000446582 742 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AL359073.1-201ENST00000448036 403 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AL589880.1-201ENST00000448271 287 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 GSTA11P-201ENST00000452866 669 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 RPL21P10-201ENST00000463521 490 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 RPS27AP9-201ENST00000477681 438 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC013828.1-201ENST00000481845 158 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC068587.1-201ENST00000483613 781 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC111000.2-201ENST00000507775 550 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 CBX3P3-201ENST00000508108 532 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 RNU6-1095P-201ENST00000516148 108 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 RNU1-45P-201ENST00000517191 141 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 SNORA31.26-201ENST00000517250 137 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 MTCO3P13-201ENST00000577757 781 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 MIR4697-201ENST00000582977 78 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AP005137.2-201ENST00000609238 400 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 VN1R7P-201ENST00000619242 903 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC007318.2-201ENST00000620999 243 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC010338.1-201ENST00000621823 717 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC093875.1-201ENST00000623688 504 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 MIR6733-201ENST00000635723 61 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 LRRC77P-213ENST00000637727 880 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 MIR622-201ENST00000638396 96 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 MFSD8-245ENST00000641743 948 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 MTCO1P23-201ENST00000415223 1526 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CLN6Q9NWW5 AC092435.3-201ENST00000565538 3654 ntBASIC2.71□□□□□ -1.98
CLN6Q9NWW5 CUL1P1-201ENST00000509510 2425 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 HMGB1P5-201ENST00000255320 642 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RNU1-35P-201ENST00000362782 153 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RNU5B-1-201ENST00000363286 116 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RNA5SP479-201ENST00000364858 117 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RNU1-64P-201ENST00000365443 163 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 CD24P4-201ENST00000382840 243 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RNU6-657P-201ENST00000383904 107 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 SNORA7.4-201ENST00000384249 137 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 SNORD51-201ENST00000384320 80 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RNA5SP38-201ENST00000410750 119 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC092638.1-201ENST00000411966 1275 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RPS15AP38-201ENST00000413110 372 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 MTCO1P39-201ENST00000426148 480 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RPS29P6-201ENST00000438196 145 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC016696.1-201ENST00000446949 318 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC109925.1-201ENST00000478069 331 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RPL30P14-201ENST00000482744 348 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 PRELID3BP6-201ENST00000503839 571 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 BOLA3P3-201ENST00000505182 232 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 ARL4AP2-201ENST00000507378 601 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 GMPSP1-201ENST00000514075 579 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RNA5SP76-201ENST00000516277 87 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC023632.1-201ENST00000518463 375 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC068339.2-201ENST00000534395 618 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms