Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SNORD66.1-201ENST00000391230 76 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 MTCYBP36-201ENST00000404146 440 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 RN7SKP56-201ENST00000410513 331 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC109780.2-201ENST00000413467 845 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC009237.5-201ENST00000414271 501 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 RPS23P10-201ENST00000416185 486 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 RPL21P32-201ENST00000419877 477 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC099677.1-201ENST00000420575 175 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 GLRXP1-201ENST00000423261 334 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 BTF3P10-201ENST00000433415 495 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 RNU7-136P-201ENST00000458819 69 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC146944.2-203ENST00000502493 354 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 NPM1P41-201ENST00000512920 831 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC139495.1-202ENST00000513164 354 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC093853.1-201ENST00000515689 483 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC025881.1-201ENST00000518851 512 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 IFITM8P-201ENST00000522529 394 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC022861.1-201ENST00000522981 663 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC006064.5-201ENST00000541782 248 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC010546.1-201ENST00000569391 485 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC055876.5-201ENST00000605667 259 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AL021997.1-201ENST00000605757 193 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 RNU4-89P-201ENST00000607443 133 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 Z99129.1-201ENST00000612510 255 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AL596245.1-201ENST00000618994 362 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AL445264.1-201ENST00000621719 171 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC138649.5-201ENST00000637456 137 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC106871.1-201ENST00000568324 3102 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AL049780.3-201ENST00000624612 1583 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 SNORA31-201ENST00000362607 130 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 Y_RNA.333-201ENST00000365274 102 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AL583835.1-201ENST00000399570 407 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AL583834.1-201ENST00000406943 343 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 MIR320C1-201ENST00000408566 88 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 CRYBB2P1-203ENST00000415709 538 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 MTATP6P27-201ENST00000416987 621 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AL161631.1-201ENST00000417933 486 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 RPS6P12-201ENST00000432491 726 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 RPL37P21-201ENST00000435890 276 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 HSPE1P28-201ENST00000443139 211 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 MTCO1P27-201ENST00000448269 226 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 RPL23AP81-201ENST00000455252 467 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 SNRPFP4-201ENST00000456366 242 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 HMGB1P25-201ENST00000468402 607 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 RPL31P13-201ENST00000484151 370 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 VN1R105P-201ENST00000486595 910 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC106872.3-201ENST00000495104 446 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC104164.2-201ENST00000496953 495 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 RNA5SP73-201ENST00000516744 108 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC105233.3-201ENST00000531125 744 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AP004247.1-201ENST00000531556 1289 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 CYP4A43P-201ENST00000568156 121 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 EIF1P4-201ENST00000572664 335 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 MAGOH2P-202ENST00000584384 429 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 MIR548AB-201ENST00000584917 84 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC005771.1-201ENST00000585581 349 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS45Q9NRW7 BNIP3P23-201ENST00000599655 511 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 PRELID3BP8-201ENST00000604148 295 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 AC103710.4-201ENST00000609301 899 ntBASIC4.36□□□□□ -1.71
VPS45Q9NRW7 C2orf27A-204ENST00000623058 969 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms