Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC010975.3-201ENST00000618727 978 ntBASIC3.48□□□□□ -1.85
HPS4Q9NQG7 AC022306.3-201ENST00000619930 550 ntBASIC3.48□□□□□ -1.85
HPS4Q9NQG7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.48□□□□□ -1.85
HPS4Q9NQG7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HPS4Q9NQG7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HPS4Q9NQG7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.48□□□□□ -1.85
HPS4Q9NQG7 AF117829.1-206ENST00000621883 3802 ntBASIC3.48□□□□□ -1.85
HPS4Q9NQG7 AC092435.3-201ENST00000565538 3654 ntBASIC3.48□□□□□ -1.85
HPS4Q9NQG7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 SNORD82-201ENST00000365530 70 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 RPL31P1-201ENST00000398116 372 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 RPS3AP26-201ENST00000398259 784 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 RNU6-55P-201ENST00000411092 107 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 RNU6-954P-201ENST00000411355 107 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 RPS15AP6-201ENST00000420703 385 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AL354692.1-201ENST00000423044 315 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 HSFY7P-201ENST00000432672 318 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 HSFY8P-201ENST00000437934 318 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 HSFY5P-201ENST00000453726 309 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC087312.1-201ENST00000471411 480 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AL049873.1-201ENST00000480540 376 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC093767.1-201ENST00000504523 156 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC010374.2-201ENST00000512933 535 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC119751.5-201ENST00000514077 770 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 RNU1-103P-201ENST00000516502 125 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AP001207.2-201ENST00000519490 539 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AP001189.2-201ENST00000527320 189 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC124312.4-201ENST00000605533 310 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AC011816.2-201ENST00000607089 556 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AL121652.1-201ENST00000608851 448 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 MTND2P41-201ENST00000637599 773 ntBASIC3.47□□□□□ -1.85
HPS4Q9NQG7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
HPS4Q9NQG7 AL353743.1-202ENST00000431724 1695 ntBASIC3.46□□□□□ -1.85
HPS4Q9NQG7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 RNA5SP258-201ENST00000362750 119 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 snoZ40.1-201ENST00000364540 72 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC016769.3-201ENST00000396562 315 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AL122016.1-201ENST00000403365 367 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC006028.1-201ENST00000438379 402 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 MTCO1P53-201ENST00000441633 699 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 HMGB3P6-201ENST00000444896 598 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 PNPLA4P1-201ENST00000458328 305 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AP001486.1-201ENST00000463339 476 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 RPS4XP22-201ENST00000480755 780 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC006483.1-201ENST00000487308 313 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 RNU6-1261P-201ENST00000517194 104 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC006518.1-201ENST00000541449 943 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC011602.1-201ENST00000546484 331 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC008127.2-201ENST00000549925 1075 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC138915.2-201ENST00000569776 97 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AP001521.1-201ENST00000609150 300 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AL391834.2-201ENST00000609982 546 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 PART1_2.1-201ENST00000612397 250 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AC026422.1-201ENST00000623961 452 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 AL445984.1-201ENST00000637834 659 ntBASIC3.46□□□□□ -1.86
HPS4Q9NQG7 MKKS-204ENST00000639674 192 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms