Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNA5SP246-201ENST00000458909 119 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 FAM172BP-201ENST00000487497 1089 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AL132838.2-201ENST00000492041 314 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 MTND4LP18-201ENST00000526864 291 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC092470.1-201ENST00000546187 132 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC009977.1-201ENST00000586015 570 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC009318.4-201ENST00000620496 486 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AP006248.2-201ENST00000623309 592 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC112484.5-201ENST00000624189 228 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AL160394.1-201ENST00000624765 724 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AL161912.2-201ENST00000565707 3007 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 SNORD115.1-201ENST00000391109 76 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 ENSAP1-201ENST00000392855 326 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 RPL31P2-201ENST00000413849 377 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 HMGB3P23-201ENST00000414981 585 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 OR8F1P-201ENST00000425243 930 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AF213884.1-201ENST00000488102 463 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 RNF138P1-201ENST00000502765 546 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC109927.2-201ENST00000506416 303 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC099522.1-202ENST00000514718 367 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 RNU6-1003P-201ENST00000517099 105 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 IGKV2-38-201ENST00000517443 247 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 MED28P5-201ENST00000528254 438 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC105233.3-201ENST00000531125 744 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 TVP23BP1-201ENST00000557500 617 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC022655.2-201ENST00000577280 318 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 MIR3913-1-201ENST00000577744 102 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 RPL23AP92-201ENST00000603609 255 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC090578.1-201ENST00000604955 591 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC010680.4-201ENST00000605334 543 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AL159169.3-201ENST00000608871 561 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC109347.2-201ENST00000610220 349 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC091834.1-201ENST00000614543 472 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC108479.2-201ENST00000617314 601 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC004009.2-201ENST00000623016 728 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AC074029.4-201ENST00000624796 1859 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 AP002001.2-201ENST00000529025 1469 ntBASIC4.24□□□□□ -1.73
USP29Q9HBJ7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
USP29Q9HBJ7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 CCT4P2-201ENST00000233836 1548 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 RN7SKP280-201ENST00000364196 304 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 RNU6-730P-201ENST00000383954 104 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 MIR134-201ENST00000385258 73 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms