Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AL672167.3-201ENST00000465951 960 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC010587.2-201ENST00000511727 448 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 IGKV2-26-201ENST00000518305 343 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC105185.1-201ENST00000518705 535 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 IGHV3-76-201ENST00000522465 295 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 MTCO1P47-201ENST00000523889 1271 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC084824.1-201ENST00000550917 1005 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 SERPINE4P-201ENST00000554978 281 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 MIR4999-201ENST00000585029 91 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC121247.2-201ENST00000604776 136 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AL603755.1-201ENST00000619504 163 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC091965.5-201ENST00000624785 342 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AC093831.2-201ENST00000624393 3427 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AL353743.1-202ENST00000431724 1695 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 RN7SKP280-201ENST00000364196 304 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 SNORA51.4-201ENST00000364993 124 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 RNU6-1293P-201ENST00000384077 107 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 SNORA51.12-201ENST00000384448 134 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 PRRC2CP1-201ENST00000404428 159 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 RNU2-42P-201ENST00000410697 113 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 BMS1P22-201ENST00000414726 313 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 FCF1P2-201ENST00000415284 583 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 BOLA3P4-201ENST00000418151 400 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC016907.1-201ENST00000419483 435 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 RPS15AP40-201ENST00000419621 391 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AL390023.1-201ENST00000428836 262 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC004865.1-201ENST00000442276 1003 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 MTND2P4-201ENST00000445034 1004 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AL109741.2-201ENST00000455561 343 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 MTND3P7-201ENST00000474435 343 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC147055.4-201ENST00000504399 745 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 MTCO3P28-201ENST00000513351 515 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 RN7SKP13-201ENST00000515933 244 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC135279.1-201ENST00000543493 504 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC011260.1-201ENST00000578420 472 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC103881.1-201ENST00000603476 538 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC024941.1-201ENST00000612250 334 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC009090.3-201ENST00000616553 565 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 RNU6-156P-201ENST00000621869 107 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.92□□□□□ -1.78
UPF2Q9HAU5 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC008264.2-201ENST00000610193 3731 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 AC108206.1-201ENST00000570186 4159 ntBASIC3.92□□□□□ -1.78
UPF2Q9HAU5 MTND5P19-201ENST00000424872 1794 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPF2Q9HAU5 MTND4P34-201ENST00000572715 1371 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPF2Q9HAU5 RNU4-35P-201ENST00000362588 141 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 SUGT1P1-201ENST00000379514 476 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 RNU6-1200P-201ENST00000384162 107 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 SNORA57.1-201ENST00000391227 145 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 RNU6-272P-201ENST00000411028 104 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 AL136133.1-201ENST00000413694 376 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 AC098592.1-201ENST00000419352 333 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 NEK4P1-201ENST00000433383 879 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.91□□□□□ -1.78
UPF2Q9HAU5 AC073063.1-201ENST00000434352 607 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 AC009969.1-201ENST00000438726 172 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.91□□□□□ -1.78
UPF2Q9HAU5 NOTCH2P1-201ENST00000443481 624 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.91□□□□□ -1.78
UPF2Q9HAU5 RPS15AP1-201ENST00000457423 391 ntBASIC3.91□□□□□ -1.78
UPF2Q9HAU5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.91□□□□□ -1.78
UPF2Q9HAU5 PLGLA-201ENST00000465668 449 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms