Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 U3.29-201ENST00000391296 212 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VCX3BQ9H321 AL162578.1-201ENST00000406202 378 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 DHFRP5-201ENST00000406944 564 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 RNF19BPX-201ENST00000426224 625 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 C4BPAP2-201ENST00000428434 478 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VCX3BQ9H321 YWHAZP8-201ENST00000436935 731 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 AC093156.1-201ENST00000440382 670 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 CACYBPP2-201ENST00000453625 678 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 OR2AF1P-201ENST00000454899 889 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 RPL31P41-201ENST00000477967 372 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 SCGB1D5P-201ENST00000515134 247 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 AC016550.3-201ENST00000515706 767 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 AC104997.1-201ENST00000519761 717 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 AC008676.3-201ENST00000521237 435 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 UCA1.1-201ENST00000620952 75 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VCX3BQ9H321 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
VCX3BQ9H321 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VCX3BQ9H321 AC024341.1-201ENST00000526444 1552 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 MIRLET7G-201ENST00000362280 84 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 RNU1-105P-201ENST00000363470 161 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 OR52E6-202ENST00000379946 954 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 RNU6-761P-201ENST00000384148 107 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 SSXP10-201ENST00000402595 565 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 RPS29P4-201ENST00000414733 161 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 ARL2BPP3-201ENST00000421226 480 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 CEACAMP9-201ENST00000442990 513 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 RPL37P4-201ENST00000448908 268 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 AC083906.5-201ENST00000503722 328 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 SNORA74D-201ENST00000516404 141 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 COX6CP5-201ENST00000527162 228 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 AC018630.1-201ENST00000541376 925 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 AC092470.1-201ENST00000546187 132 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 AC074029.2-201ENST00000551045 634 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 BNIP3P11-201ENST00000603878 563 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 AC067959.1-201ENST00000604334 379 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
VCX3BQ9H321 MTND4P8-201ENST00000514997 1362 ntBASIC2.46□□□□□ -2.02
VCX3BQ9H321 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.46□□□□□ -2.02
VCX3BQ9H321 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VCX3BQ9H321 AC010680.1-201ENST00000590024 3590 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VCX3BQ9H321 RNU6-819P-201ENST00000364116 107 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VCX3BQ9H321 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 RNU6-152P-201ENST00000384037 107 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 AL049693.1-201ENST00000402760 611 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 MTND1P23-201ENST00000416931 372 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 MTCO3P30-201ENST00000426425 670 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 AL035246.1-201ENST00000433554 1255 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 AC112220.1-201ENST00000434628 355 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 RPL7P29-201ENST00000437151 728 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 AC112653.1-201ENST00000443851 386 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 AL513328.1-201ENST00000446460 224 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 AC091959.2-201ENST00000477363 321 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 AL121772.2-201ENST00000614331 297 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 AL034408.1-202ENST00000636088 415 ntBASIC2.45□□□□□ -2.02
VCX3BQ9H321 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.45□□□□□ -2.02
VCX3BQ9H321 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VCX3BQ9H321 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.44□□□□□ -2.02
VCX3BQ9H321 ZNF658B-202ENST00000615961 3375 ntBASIC2.44□□□□□ -2.02
VCX3BQ9H321 RPL21P132-201ENST00000331267 462 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms