Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC012321.1-201ENST00000561622 1588 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC021755.1-201ENST00000559747 1447 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 ZNF33CP-201ENST00000432492 2030 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AL079343.1-201ENST00000572358 1771 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 MTCO1P23-201ENST00000415223 1526 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 RN7SKP280-201ENST00000364196 304 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 RNA5SP515-201ENST00000364570 118 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 SNORA73.2-201ENST00000364946 201 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 RPL31P1-201ENST00000398116 372 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AL136116.1-201ENST00000403591 381 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 RN7SKP159-201ENST00000410657 292 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 RPL17P36-201ENST00000420302 549 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 RPL7P30-201ENST00000420888 709 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC245054.1-201ENST00000420944 258 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC125238.1-201ENST00000448842 249 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC093267.1-201ENST00000489176 961 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 RNA5SP380-201ENST00000517190 98 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 RANP9-201ENST00000519957 271 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 MTCO1P47-201ENST00000523889 1271 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC084824.1-201ENST00000550917 1005 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC109446.2-201ENST00000567872 497 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC024560.3-201ENST00000608482 349 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AL391497.1-201ENST00000608671 547 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC105429.2-201ENST00000610567 517 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 AL079305.1-201ENST00000623159 3008 ntBASIC3.36□□□□□ -1.87
HOXD1Q9GZZ0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AC007496.3-201ENST00000624987 3443 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AC073073.2-201ENST00000609827 2578 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 RNU1-75P-201ENST00000347264 129 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 RNU6-553P-201ENST00000364047 96 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 RNVU1-3-201ENST00000364313 161 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 Y_RNA.560-201ENST00000384689 102 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 MIR591-201ENST00000385290 95 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 SOD2P1-201ENST00000396543 562 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AL445189.1-201ENST00000405722 338 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 MIR1193-201ENST00000408109 78 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AC012498.1-201ENST00000424037 437 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AC005517.2-201ENST00000424673 553 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 ZYG11AP1-201ENST00000430329 837 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 CKS1BP5-201ENST00000434172 273 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 MTND4P6-201ENST00000438297 472 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 UBE2D3P4-201ENST00000441973 436 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 AC005297.2-201ENST00000450430 606 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 MTCO3P11-201ENST00000455103 774 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 HMGB3P30-201ENST00000457863 606 ntBASIC3.35□□□□□ -1.87
HOXD1Q9GZZ0 MEMO1P3-201ENST00000459811 302 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms