Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM4Q9C037 AP004372.1-201ENST00000604842 844 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 AC068831.7-201ENST00000616954 363 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 AC090897.3-201ENST00000636973 1157 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM4Q9C037 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 AC022031.1-201ENST00000585985 2593 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 CD24P4-201ENST00000382840 243 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM4Q9C037 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 AL627224.1-201ENST00000448334 444 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 SNORD109B-201ENST00000458961 67 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 SNORD109A-201ENST00000459128 67 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM4Q9C037 KATNBL1P4-201ENST00000503545 918 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 AC009901.1-201ENST00000506703 541 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 AC010625.1-201ENST00000511296 403 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 AC026412.2-201ENST00000512270 1075 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 AC234778.2-201ENST00000566241 354 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM4Q9C037 AC243829.7-201ENST00000633081 225 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.77□□□□□ -1.97
TRIM4Q9C037 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TRIM4Q9C037 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM4Q9C037 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM4Q9C037 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM4Q9C037 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRIM4Q9C037 AL356057.2-201ENST00000403318 432 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM4Q9C037 BX276092.3-201ENST00000424182 230 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AC005517.2-201ENST00000424673 553 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AC019097.1-201ENST00000424783 735 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 ARL5AP4-201ENST00000430731 512 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM4Q9C037 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM4Q9C037 AL162389.1-201ENST00000449233 177 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 OR51B8P-201ENST00000449892 769 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 MTCO3P35-201ENST00000485582 781 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM4Q9C037 HIGD1AP13-201ENST00000509878 289 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM4Q9C037 AP000873.5-201ENST00000533906 236 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AP003717.3-201ENST00000544832 1180 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 DNAJC8P1-201ENST00000554535 372 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AC106734.1-201ENST00000568646 663 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AC138473.1-201ENST00000605717 526 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AC135803.1-201ENST00000608748 565 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AL355493.4-201ENST00000618530 292 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AL590808.1-201ENST00000618696 141 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 MIR7111-201ENST00000619751 72 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AC002064.3-201ENST00000623448 346 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM4Q9C037 AP001350.1-201ENST00000601906 1524 ntBASIC2.76□□□□□ -1.97
TRIM4Q9C037 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
TRIM4Q9C037 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM4Q9C037 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM4Q9C037 RNU1-35P-201ENST00000362782 153 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 U3.12-201ENST00000364498 214 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 SNORA14A-201ENST00000364773 135 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 RNA5SP181-201ENST00000410246 98 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 RNU2-25P-201ENST00000411041 191 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM4Q9C037 AC233981.1-201ENST00000423224 461 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 AL445528.1-201ENST00000426330 420 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM4Q9C037 AC087499.2-201ENST00000432861 149 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM4Q9C037 Z77249.1-201ENST00000444622 1175 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 RPL34P26-201ENST00000445636 354 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 MRPL50P4-201ENST00000446432 475 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 WASF1P1-201ENST00000447560 1131 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 ST13P20-201ENST00000447996 1065 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM4Q9C037 AC104687.1-201ENST00000485829 412 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 SNORA31.11-201ENST00000516528 139 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.75□□□□□ -1.97
TRIM4Q9C037 AC074029.1-201ENST00000552531 1044 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM4Q9C037 AC015871.2-201ENST00000603605 948 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 AC025754.2-201ENST00000606491 432 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 AC024560.3-201ENST00000608482 349 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.75□□□□□ -1.97
TRIM4Q9C037 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM4Q9C037 AL512283.1-201ENST00000606756 1384 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 RNU6-1027P-201ENST00000383998 107 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 MTCO3P4-201ENST00000419236 787 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 AL645937.1-202ENST00000421799 937 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 AC233728.2-201ENST00000425348 757 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms