Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 TIMM9P1-201ENST00000436122 256 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AL691482.1-201ENST00000453255 87 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 snoU13.8-201ENST00000458890 104 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC006511.1-201ENST00000470614 315 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 RN7SL809P-201ENST00000482040 297 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC083982.1-201ENST00000485679 344 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 TTC39CP1-201ENST00000512513 755 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 HIGD1AP5-201ENST00000529959 259 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC018552.3-201ENST00000567416 561 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC060771.1-201ENST00000582031 164 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 MIR4480-201ENST00000582492 71 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AP001029.3-201ENST00000588063 596 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC106900.2-201ENST00000604994 317 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 FAM25E-202ENST00000608562 189 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC040896.1-201ENST00000613819 479 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC131238.1-201ENST00000617135 328 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 RNU6-156P-201ENST00000621869 107 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC099494.2-201ENST00000623371 978 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AL133216.2-202ENST00000634512 349 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 AC004972.1-201ENST00000623934 2209 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXP3Q9BZS1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC009902.3-201ENST00000606235 2172 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.22-201ENST00000362492 102 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 RNA5SP258-201ENST00000362750 119 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 RNA5SP123-201ENST00000363244 119 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 SNORA56-201ENST00000383966 129 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 RNU6-1226P-201ENST00000384317 107 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 RNU4-26P-201ENST00000410270 107 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 MTCO2P27-201ENST00000420740 428 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC234779.1-201ENST00000425910 285 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 COX6CP15-201ENST00000426313 211 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 OR4K11P-201ENST00000431829 904 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC092162.1-201ENST00000432828 434 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 MTND3P2-201ENST00000438452 342 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 RPS26P2-201ENST00000440331 348 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC092647.2-201ENST00000452998 253 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.631-201ENST00000459607 101 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AP001992.1-205ENST00000462248 379 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 MTND4P17-201ENST00000470444 350 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AL136126.1-201ENST00000473603 402 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC104057.1-201ENST00000515547 497 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.665-201ENST00000516177 98 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 FRG2DP-202ENST00000566967 323 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 MIR4504-201ENST00000577413 92 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC090615.1-201ENST00000577519 154 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 OR4K8P-201ENST00000578842 1048 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 MIR3934-201ENST00000579806 107 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 POLR3GP2-201ENST00000588366 668 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 PSMA6P4-201ENST00000603247 718 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AL159972.1-201ENST00000625150 448 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 AC009313.2-201ENST00000417893 1941 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 LARP1BP1-201ENST00000506036 1359 ntBASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 SCN1A-220ENST00000641603 12506 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms