Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNA5SP315-201ENST00000516340 116 ntBASIC4.42□□□□□ -1.7
SMOQ99835 RNA5SP312-201ENST00000517068 116 ntBASIC4.42□□□□□ -1.7
SMOQ99835 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.42□□□□□ -1.7
SMOQ99835 AC074050.1-201ENST00000563247 211 ntBASIC4.42□□□□□ -1.7
SMOQ99835 AC107954.1-201ENST00000565906 727 ntBASIC4.42□□□□□ -1.7
SMOQ99835 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.42□□□□□ -1.7
SMOQ99835 AC006504.3-201ENST00000586818 523 ntBASIC4.42□□□□□ -1.7
SMOQ99835 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.42□□□□□ -1.7
SMOQ99835 YWHAQP7-201ENST00000603536 658 ntBASIC4.42□□□□□ -1.7
SMOQ99835 AC011816.2-201ENST00000607089 556 ntBASIC4.42□□□□□ -1.7
SMOQ99835 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.42□□□□□ -1.7
SMOQ99835 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.42□□□□□ -1.7
SMOQ99835 AL008636.1-201ENST00000625038 1018 ntBASIC4.42□□□□□ -1.7
SMOQ99835 AC010149.2-201ENST00000637608 315 ntBASIC4.42□□□□□ -1.7
SMOQ99835 LRRC77P-213ENST00000637727 880 ntBASIC4.42□□□□□ -1.7
SMOQ99835 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SMOQ99835 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMOQ99835 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SMOQ99835 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SMOQ99835 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMOQ99835 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMOQ99835 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.42□□□□□ -1.7
SMOQ99835 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMOQ99835 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMOQ99835 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMOQ99835 OR52B1P-201ENST00000316506 909 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AL022722.2-201ENST00000402519 180 ntBASIC4.41□□□□□ -1.7
SMOQ99835 HDGFP1-201ENST00000405943 252 ntBASIC4.41□□□□□ -1.7
SMOQ99835 MIR1179-201ENST00000408703 91 ntBASIC4.41□□□□□ -1.7
SMOQ99835 MTND3P17-201ENST00000416968 344 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AC127526.1-201ENST00000417526 366 ntBASIC4.41□□□□□ -1.7
SMOQ99835 RPS27AP12-201ENST00000429552 465 ntBASIC4.41□□□□□ -1.7
SMOQ99835 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 OR4C10P-201ENST00000434991 931 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 AC127537.2-201ENST00000439258 465 ntBASIC4.41□□□□□ -1.7
SMOQ99835 RPS4XP4-201ENST00000443195 763 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.41□□□□□ -1.7
SMOQ99835 VN1R34P-201ENST00000447387 883 ntBASIC4.41□□□□□ -1.7
SMOQ99835 NFU1P2-201ENST00000448700 469 ntBASIC4.41□□□□□ -1.7
SMOQ99835 C1DP4-201ENST00000455429 424 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AL359385.1-201ENST00000456509 365 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 RPL31P58-201ENST00000469001 379 ntBASIC4.41□□□□□ -1.7
SMOQ99835 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SMOQ99835 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.41□□□□□ -1.7
SMOQ99835 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.41□□□□□ -1.7
SMOQ99835 AC021146.3-201ENST00000511911 260 ntBASIC4.41□□□□□ -1.7
SMOQ99835 RN7SKP21-201ENST00000516503 220 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.41□□□□□ -1.7
SMOQ99835 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.41□□□□□ -1.7
SMOQ99835 AC245014.2-201ENST00000603689 287 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AP000907.4-201ENST00000604143 237 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AC246785.4-201ENST00000605374 287 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AC055876.5-201ENST00000605667 259 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AL590282.1-201ENST00000610379 1136 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AC023043.4-201ENST00000612081 449 ntBASIC4.41□□□□□ -1.7
SMOQ99835 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.41□□□□□ -1.7
SMOQ99835 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMOQ99835 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
SMOQ99835 AC091905.1-201ENST00000624400 311 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMOQ99835 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.41□□□□□ -1.7
SMOQ99835 AC024560.2-201ENST00000507981 1497 ntBASIC4.41□□□□□ -1.7
SMOQ99835 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMOQ99835 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMOQ99835 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMOQ99835 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMOQ99835 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.41□□□□□ -1.7
SMOQ99835 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.4□□□□□ -1.7
SMOQ99835 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMOQ99835 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMOQ99835 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMOQ99835 AC010300.1-201ENST00000600671 5134 ntBASIC4.4□□□□□ -1.7
SMOQ99835 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMOQ99835 AC011155.1-201ENST00000316512 456 ntBASIC4.4□□□□□ -1.71
SMOQ99835 RNU6-1090P-201ENST00000364065 94 ntBASIC4.4□□□□□ -1.71
SMOQ99835 Y_RNA.234-201ENST00000364409 97 ntBASIC4.4□□□□□ -1.71
SMOQ99835 RNU6-282P-201ENST00000365357 103 ntBASIC4.4□□□□□ -1.71
SMOQ99835 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SMOQ99835 Y_RNA.409-201ENST00000383990 98 ntBASIC4.4□□□□□ -1.71
SMOQ99835 RNU6-1103P-201ENST00000384150 107 ntBASIC4.4□□□□□ -1.71
SMOQ99835 RNU6-1207P-201ENST00000384343 107 ntBASIC4.4□□□□□ -1.71
SMOQ99835 RNU1-13P-201ENST00000384499 162 ntBASIC4.4□□□□□ -1.71
SMOQ99835 AL359704.1-201ENST00000411586 781 ntBASIC4.4□□□□□ -1.71
SMOQ99835 RPL31P2-201ENST00000413849 377 ntBASIC4.4□□□□□ -1.71
SMOQ99835 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.4□□□□□ -1.71
SMOQ99835 AL356095.1-201ENST00000417217 199 ntBASIC4.4□□□□□ -1.71
SMOQ99835 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMOQ99835 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.4□□□□□ -1.71
SMOQ99835 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.4□□□□□ -1.71
SMOQ99835 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.4□□□□□ -1.71
SMOQ99835 MTCO2P11-201ENST00000431069 680 ntBASIC4.4□□□□□ -1.71
SMOQ99835 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms