Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
NPAS2Q99743 ST13P14-201ENST00000474095 734 ntBASIC3.13□□□□□ -1.91
NPAS2Q99743 AC013828.1-201ENST00000481845 158 ntBASIC3.13□□□□□ -1.91
NPAS2Q99743 AC093801.2-201ENST00000503966 1050 ntBASIC3.13□□□□□ -1.91
NPAS2Q99743 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS2Q99743 FCF1P8-201ENST00000510322 597 ntBASIC3.13□□□□□ -1.91
NPAS2Q99743 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS2Q99743 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS2Q99743 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS2Q99743 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.13□□□□□ -1.91
NPAS2Q99743 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS2Q99743 UBE2NP1-201ENST00000545592 458 ntBASIC3.13□□□□□ -1.91
NPAS2Q99743 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS2Q99743 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS2Q99743 AL160281.1-201ENST00000605307 311 ntBASIC3.13□□□□□ -1.91
NPAS2Q99743 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.13□□□□□ -1.91
NPAS2Q99743 AC092954.1-201ENST00000609121 445 ntBASIC3.13□□□□□ -1.91
NPAS2Q99743 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS2Q99743 AL591516.1-201ENST00000611326 274 ntBASIC3.13□□□□□ -1.91
NPAS2Q99743 AP000720.1-201ENST00000625091 483 ntBASIC3.13□□□□□ -1.91
NPAS2Q99743 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.13□□□□□ -1.91
NPAS2Q99743 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.13□□□□□ -1.91
NPAS2Q99743 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPAS2Q99743 MCTS2P-201ENST00000394552 546 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 RPL7P27-201ENST00000403775 720 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 RPS15AP38-201ENST00000413110 372 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 UBE2D3P2-201ENST00000424409 445 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 AC012497.1-201ENST00000429392 575 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 ARF4P4-201ENST00000439608 520 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC244505.3-201ENST00000454598 187 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.12□□□□□ -1.91
NPAS2Q99743 RPL32P34-201ENST00000486380 400 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 CAB39P1-201ENST00000502277 460 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC021678.1-201ENST00000505195 936 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 AC006390.1-201ENST00000508068 283 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC010625.1-201ENST00000511296 403 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 RN7SKP57-201ENST00000517248 293 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.12□□□□□ -1.91
NPAS2Q99743 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
NPAS2Q99743 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC022690.1-201ENST00000526681 550 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC090502.2-201ENST00000549267 280 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 RPL21P12-201ENST00000559810 515 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS2Q99743 FAM60BP-201ENST00000578364 658 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 MIR3908-201ENST00000579798 126 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 COX6CP3-201ENST00000580869 223 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 MIR4276-201ENST00000584832 70 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 AL157770.1-201ENST00000623049 439 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.12□□□□□ -1.91
NPAS2Q99743 AC087821.2-201ENST00000637086 450 ntBASIC3.12□□□□□ -1.91
NPAS2Q99743 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NPAS2Q99743 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPAS2Q99743 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPAS2Q99743 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NPAS2Q99743 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.11□□□□□ -1.91
NPAS2Q99743 AC090740.1-201ENST00000623193 2262 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.11□□□□□ -1.91
NPAS2Q99743 RNU6-657P-201ENST00000383904 107 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 ARF4P3-201ENST00000397387 509 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AL035405.1-201ENST00000400795 710 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
NPAS2Q99743 AC063979.1-201ENST00000415539 377 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AC245054.2-201ENST00000415639 319 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS2Q99743 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.11□□□□□ -1.91
NPAS2Q99743 MTCO1P39-201ENST00000426148 480 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.11□□□□□ -1.91
NPAS2Q99743 AC091862.1-201ENST00000438016 1100 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AC009969.1-201ENST00000438726 172 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.11□□□□□ -1.91
NPAS2Q99743 HMGB3P6-201ENST00000444896 598 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 COX6CP18-201ENST00000448769 222 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms