Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDCA3Q99618 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.59□□□□□ -1.83
CDCA3Q99618 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.59□□□□□ -1.83
CDCA3Q99618 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.59□□□□□ -1.83
CDCA3Q99618 LARP7P2-201ENST00000575306 125 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.59□□□□□ -1.83
CDCA3Q99618 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.59□□□□□ -1.83
CDCA3Q99618 KLKP1-201ENST00000595979 403 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.59□□□□□ -1.83
CDCA3Q99618 AC069304.2-201ENST00000605154 435 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 U7.8-201ENST00000619968 63 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AP002791.1-201ENST00000623291 381 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDCA3Q99618 DCAF13P1-201ENST00000495256 1330 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 ZNF37BP-203ENST00000452306 1352 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDCA3Q99618 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CDCA3Q99618 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDCA3Q99618 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CDCA3Q99618 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDCA3Q99618 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.58□□□□□ -1.84
CDCA3Q99618 AC007656.2-201ENST00000624902 4547 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.58□□□□□ -1.84
CDCA3Q99618 MIR422A-201ENST00000362286 90 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 RNU6-374P-201ENST00000364146 108 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 RNU6-356P-201ENST00000384140 107 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 RNU6-1122P-201ENST00000384449 107 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 MTND4P13-201ENST00000402078 1023 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AL138885.1-201ENST00000405921 675 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 RN7SKP56-201ENST00000410513 331 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.58□□□□□ -1.84
CDCA3Q99618 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
CDCA3Q99618 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.58□□□□□ -1.84
CDCA3Q99618 USP9YP36-201ENST00000424581 829 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.58□□□□□ -1.84
CDCA3Q99618 MTND1P32-201ENST00000433043 938 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDCA3Q99618 MTCYBP11-201ENST00000447254 1109 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 RPL39P6-201ENST00000448289 150 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 RPL29P29-201ENST00000448725 423 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 HMGN2P7-201ENST00000456186 273 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.58□□□□□ -1.84
CDCA3Q99618 RPL7P38-201ENST00000488396 739 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 PTGES3P3-201ENST00000511479 482 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.58□□□□□ -1.84
CDCA3Q99618 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.58□□□□□ -1.84
CDCA3Q99618 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.58□□□□□ -1.84
CDCA3Q99618 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.58□□□□□ -1.84
CDCA3Q99618 DUXAP1-201ENST00000556632 463 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AC087465.1-201ENST00000560574 245 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AL512347.1-201ENST00000566420 503 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AL354943.1-201ENST00000572103 781 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.58□□□□□ -1.84
CDCA3Q99618 Z99289.3-201ENST00000605586 594 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 BRDTP1-201ENST00000605735 677 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AC009464.1-201ENST00000615731 469 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AC006386.2-201ENST00000624491 75 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AC012005.1-201ENST00000624575 75 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 MIR1322-201ENST00000638013 71 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.58□□□□□ -1.84
CDCA3Q99618 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.58□□□□□ -1.84
CDCA3Q99618 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
CDCA3Q99618 OTUD4P1-201ENST00000237841 3067 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDCA3Q99618 ZNF807-201ENST00000328088 1707 ntBASIC3.58□□□□□ -1.84
CDCA3Q99618 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDCA3Q99618 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDCA3Q99618 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDCA3Q99618 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CDCA3Q99618 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.58□□□□□ -1.84
CDCA3Q99618 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
CDCA3Q99618 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDCA3Q99618 SNORD113-6-201ENST00000363345 75 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 RNU6-7-201ENST00000364784 107 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 U3.15-201ENST00000365398 212 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 RNU6-8-201ENST00000365467 107 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.57□□□□□ -1.84
CDCA3Q99618 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDCA3Q99618 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.57□□□□□ -1.84
CDCA3Q99618 AC005005.2-201ENST00000420779 380 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 AC006989.1-201ENST00000427212 131 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.57□□□□□ -1.84
CDCA3Q99618 MTND2P20-201ENST00000440805 661 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.57□□□□□ -1.84
CDCA3Q99618 AL590399.6-201ENST00000446396 307 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 RPS4XP5-202ENST00000449995 1334 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.57□□□□□ -1.84
CDCA3Q99618 RPL18AP17-201ENST00000455326 198 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 PABPC1P3-201ENST00000469174 459 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.57□□□□□ -1.84
CDCA3Q99618 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDCA3Q99618 MTCO3P44-201ENST00000510977 541 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 RNU6-583P-201ENST00000516012 92 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.57□□□□□ -1.84
CDCA3Q99618 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.57□□□□□ -1.84
CDCA3Q99618 OR5AK1P-201ENST00000524837 922 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 AP001636.2-201ENST00000525517 696 ntBASIC3.57□□□□□ -1.84
CDCA3Q99618 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.57□□□□□ -1.84
CDCA3Q99618 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms