Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC091862.1-201ENST00000438016 1100 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.75□□□□□ -1.65
NUP88Q99567 RPS11P1-201ENST00000451072 473 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AL033528.1-201ENST00000453780 140 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP88Q99567 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP88Q99567 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP88Q99567 AP003392.2-201ENST00000527269 208 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP88Q99567 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.75□□□□□ -1.65
NUP88Q99567 AC063950.1-201ENST00000552036 308 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP88Q99567 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP88Q99567 AC120057.2-201ENST00000571520 271 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 MTND1P15-201ENST00000579262 949 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.75□□□□□ -1.65
NUP88Q99567 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP88Q99567 AC008638.3-201ENST00000603341 463 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AL359999.1-201ENST00000604513 294 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AL451086.1-201ENST00000605596 223 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AC055876.5-201ENST00000605667 259 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 OR10AB1P-201ENST00000609613 938 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AC064801.1-201ENST00000612025 407 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 AC008498.1-201ENST00000613012 531 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP88Q99567 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP88Q99567 AC008785.1-201ENST00000624475 456 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP88Q99567 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NUP88Q99567 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.75□□□□□ -1.65
NUP88Q99567 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NUP88Q99567 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP88Q99567 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP88Q99567 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP88Q99567 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.74□□□□□ -1.65
NUP88Q99567 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP88Q99567 OR52B1P-201ENST00000316506 909 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP88Q99567 SNORA75-201ENST00000384158 137 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NUP88Q99567 RN7SKP202-201ENST00000410439 330 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 RNU2-16P-201ENST00000410712 136 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP88Q99567 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP88Q99567 UBE2V1P13-201ENST00000436983 439 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 ATP5C1P1-201ENST00000441945 895 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP88Q99567 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP88Q99567 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP88Q99567 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP88Q99567 AC021382.1-201ENST00000483523 359 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 AC012170.1-201ENST00000495139 359 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP88Q99567 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP88Q99567 AC022878.1-201ENST00000530684 149 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP88Q99567 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.74□□□□□ -1.65
NUP88Q99567 AC005951.1-201ENST00000576706 485 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP88Q99567 AC068790.2-201ENST00000602601 557 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 MIR432-201ENST00000606207 94 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 AC009509.4-201ENST00000619202 509 ntBASIC4.74□□□□□ -1.65
NUP88Q99567 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP88Q99567 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP88Q99567 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP88Q99567 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP88Q99567 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP88Q99567 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NUP88Q99567 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUP88Q99567 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUP88Q99567 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP88Q99567 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP88Q99567 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP88Q99567 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP88Q99567 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP88Q99567 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP88Q99567 SNORD74.4-201ENST00000364129 80 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 Y_RNA.517-201ENST00000384551 106 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 AL121834.1-202ENST00000404494 277 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 FCF1P10-201ENST00000407590 479 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 RNA5SP104-201ENST00000410989 118 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 AC112653.1-201ENST00000443851 386 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 AL353691.1-201ENST00000451332 387 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 AC098824.1-201ENST00000453565 980 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 AP1S2P1-201ENST00000457344 379 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 AC007537.2-201ENST00000472093 511 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 AC110792.1-201ENST00000491826 472 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP88Q99567 NDUFB4P2-201ENST00000509515 391 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP88Q99567 RNU4-60P-201ENST00000517239 135 ntBASIC4.73□□□□□ -1.65
NUP88Q99567 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP88Q99567 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP88Q99567 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP88Q99567 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP88Q99567 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.73□□□□□ -1.65
NUP88Q99567 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP88Q99567 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.73□□□□□ -1.65
NUP88Q99567 AC078795.2-201ENST00000602835 1252 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms