Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PABPC1P6-201ENST00000445594 1829 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 ZNF285B-201ENST00000561698 1767 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 AC093278.2-201ENST00000564956 2485 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 AC020633.1-201ENST00000468439 2247 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PHOX2BQ99453 FAR2P2-201ENST00000413041 594 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 AC002553.3-201ENST00000453002 341 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 AL136097.1-201ENST00000456945 913 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 AC008958.1-201ENST00000511047 682 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 KHDC1P1-201ENST00000511053 508 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 BX510359.5-201ENST00000515651 304 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 SCARNA18.1-201ENST00000516330 83 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 RNU6-143P-201ENST00000516942 93 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 COX6CP7-201ENST00000597056 208 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 AL158827.2-201ENST00000602494 330 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 AC073410.2-201ENST00000603240 332 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 uc_338.18-201ENST00000615451 175 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 RMST_4.1-201ENST00000616886 107 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 AL691447.3-201ENST00000635020 330 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 AL049555.1-201ENST00000562834 1933 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PHOX2BQ99453 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PHOX2BQ99453 AL451142.2-201ENST00000429076 2090 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PHOX2BQ99453 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.3□□□□□ -1.4
PHOX2BQ99453 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PHOX2BQ99453 AC105114.1-201ENST00000624795 1862 ntBASIC6.3□□□□□ -1.4
PHOX2BQ99453 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PHOX2BQ99453 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 AL359976.1-201ENST00000418655 3528 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 RPL9P7-201ENST00000330965 580 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 RNA5SP52-201ENST00000362448 134 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 RNU6-774P-201ENST00000363238 107 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 Y_RNA.534-201ENST00000384599 112 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 AL603910.2-201ENST00000407268 136 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 AC016397.1-201ENST00000412463 242 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 AL139156.1-201ENST00000412785 841 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 RPL7AP73-201ENST00000413490 353 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 AL159987.2-201ENST00000432754 307 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 AL513043.1-201ENST00000439124 535 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 RPL9P9-202ENST00000466501 579 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 HMGN2P13-201ENST00000476476 274 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 AC067942.3-201ENST00000512025 362 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 GMPSP1-201ENST00000514075 579 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 AC026951.1-201ENST00000559530 2459 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 AC005332.5-201ENST00000591222 2919 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 MIR6809-201ENST00000612189 116 ntBASIC6.29□□□□□ -1.4
PHOX2BQ99453 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PHOX2BQ99453 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PHOX2BQ99453 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 AC005618.1-201ENST00000606901 3148 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms