Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.81□□□□□ -2.12
SPENQ96T58 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SPENQ96T58 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SPENQ96T58 RNA5SP502-201ENST00000362694 119 ntBASIC1.81□□□□□ -2.12
SPENQ96T58 EI24P1-201ENST00000416584 867 ntBASIC1.81□□□□□ -2.12
SPENQ96T58 AL353597.2-202ENST00000434901 373 ntBASIC1.81□□□□□ -2.12
SPENQ96T58 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.81□□□□□ -2.12
SPENQ96T58 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.81□□□□□ -2.12
SPENQ96T58 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SPENQ96T58 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SPENQ96T58 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SPENQ96T58 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.8□□□□□ -2.12
SPENQ96T58 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SPENQ96T58 AL139811.1-201ENST00000424779 2299 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.8□□□□□ -2.12
SPENQ96T58 RNU6-356P-201ENST00000384140 107 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SPENQ96T58 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 AC104332.2-201ENST00000429959 156 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 CBX3P4-201ENST00000538909 354 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 AC005951.1-201ENST00000576706 485 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.8□□□□□ -2.12
SPENQ96T58 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SPENQ96T58 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
SPENQ96T58 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SPENQ96T58 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.8□□□□□ -2.12
SPENQ96T58 AL122125.1-201ENST00000616999 600 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 MIR219B-201ENST00000637023 88 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 AC010680.1-201ENST00000590024 3590 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
SPENQ96T58 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
SPENQ96T58 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SPENQ96T58 Y_RNA.327-201ENST00000365201 102 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 AC009969.1-201ENST00000438726 172 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 RPL21P18-201ENST00000469899 480 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 AC025260.1-201ENST00000548858 430 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.8□□□□□ -2.12
SPENQ96T58 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.8□□□□□ -2.12
SPENQ96T58 AC010872.1-201ENST00000624225 675 ntBASIC1.8□□□□□ -2.12
SPENQ96T58 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SPENQ96T58 RNU6-342P-201ENST00000384521 104 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.79□□□□□ -2.12
SPENQ96T58 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.79□□□□□ -2.12
SPENQ96T58 SDR42E1P3-201ENST00000438345 502 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 USP9YP8-201ENST00000441913 500 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 RNU7-95P-201ENST00000459222 64 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 AC017007.3-201ENST00000479865 435 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.79□□□□□ -2.12
SPENQ96T58 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.79□□□□□ -2.12
SPENQ96T58 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.79□□□□□ -2.12
SPENQ96T58 OR5D17P-201ENST00000531492 978 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 AL354943.1-201ENST00000572103 781 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SPENQ96T58 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SPENQ96T58 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SPENQ96T58 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SPENQ96T58 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.79□□□□□ -2.12
SPENQ96T58 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.79□□□□□ -2.12
SPENQ96T58 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.79□□□□□ -2.12
SPENQ96T58 MIR4452-201ENST00000583004 71 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 RPAP2P1-201ENST00000603626 1168 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.79□□□□□ -2.12
SPENQ96T58 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.79□□□□□ -2.12
SPENQ96T58 RNU7-170P-201ENST00000459303 61 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 MLLT10P2-201ENST00000506434 249 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 AP006248.2-201ENST00000623309 592 ntBASIC1.79□□□□□ -2.12
SPENQ96T58 RNU1-57P-201ENST00000384491 166 ntBASIC1.78□□□□□ -2.12
SPENQ96T58 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.78□□□□□ -2.12
SPENQ96T58 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.78□□□□□ -2.12
SPENQ96T58 OR4H12P-201ENST00000556269 907 ntBASIC1.78□□□□□ -2.12
SPENQ96T58 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
SPENQ96T58 AL359740.1-201ENST00000624340 592 ntBASIC1.78□□□□□ -2.12
SPENQ96T58 AL137159.1-201ENST00000452808 512 ntBASIC1.78□□□□□ -2.12
SPENQ96T58 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.78□□□□□ -2.12
SPENQ96T58 AL359198.2-201ENST00000611836 194 ntBASIC1.78□□□□□ -2.12
SPENQ96T58 MIR6895-201ENST00000613497 78 ntBASIC1.78□□□□□ -2.12
SPENQ96T58 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.78□□□□□ -2.12
SPENQ96T58 AC002076.2-201ENST00000617362 122 ntBASIC1.78□□□□□ -2.12
SPENQ96T58 AC103988.1-201ENST00000566382 2177 ntBASIC1.78□□□□□ -2.12
SPENQ96T58 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.78□□□□□ -2.12
SPENQ96T58 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
SPENQ96T58 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.78□□□□□ -2.13
SPENQ96T58 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.78□□□□□ -2.13
SPENQ96T58 AC006116.7-201ENST00000590141 756 ntBASIC1.78□□□□□ -2.13
SPENQ96T58 AP000787.2-201ENST00000604432 568 ntBASIC1.78□□□□□ -2.13
SPENQ96T58 KPNA2P1-201ENST00000458289 1591 ntBASIC1.78□□□□□ -2.13
SPENQ96T58 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.77□□□□□ -2.13
SPENQ96T58 ASNSP4-201ENST00000511103 447 ntBASIC1.77□□□□□ -2.13
SPENQ96T58 AP000889.2-201ENST00000532684 490 ntBASIC1.77□□□□□ -2.13
SPENQ96T58 PSMA3P-201ENST00000555485 635 ntBASIC1.77□□□□□ -2.13
SPENQ96T58 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.77□□□□□ -2.13
SPENQ96T58 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.77□□□□□ -2.13
SPENQ96T58 MIR6515-201ENST00000619843 57 ntBASIC1.77□□□□□ -2.13
SPENQ96T58 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SPENQ96T58 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.77□□□□□ -2.13
SPENQ96T58 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SPENQ96T58 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms