Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC106785.4-201ENST00000569492 412 ntBASIC5.14□□□□□ -1.59
CITED4Q96RK1 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.14□□□□□ -1.59
CITED4Q96RK1 MIR212-201ENST00000586026 110 ntBASIC5.14□□□□□ -1.59
CITED4Q96RK1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CITED4Q96RK1 AC107294.1-201ENST00000609524 467 ntBASIC5.14□□□□□ -1.59
CITED4Q96RK1 AL591926.1-201ENST00000620542 217 ntBASIC5.14□□□□□ -1.59
CITED4Q96RK1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CITED4Q96RK1 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CITED4Q96RK1 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CITED4Q96RK1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CITED4Q96RK1 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CITED4Q96RK1 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CITED4Q96RK1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 AL356489.2-201ENST00000566968 3528 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 SDAD1P2-201ENST00000441308 2028 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CITED4Q96RK1 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CITED4Q96RK1 DEFB108F-201ENST00000344638 222 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 RNU6-1167P-201ENST00000363227 94 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 RNA5SP382-201ENST00000363355 112 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 RNA5SP152-201ENST00000365184 110 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 SNORA70.6-201ENST00000383934 134 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 MIR301A-201ENST00000385261 86 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 RNU4-6P-201ENST00000410804 122 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 RN7SKP279-201ENST00000411383 298 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 MRPS21P5-201ENST00000417885 231 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 MYL6P3-201ENST00000436904 432 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 RPL21P23-201ENST00000446654 460 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 GSTA11P-201ENST00000452866 669 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC112187.1-201ENST00000455837 479 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 HMGB3P30-201ENST00000457863 606 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 SNORD108-201ENST00000459332 71 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC009120.1-201ENST00000493458 473 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 SUMO2P6-201ENST00000505273 288 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 AL117187.1-201ENST00000555482 181 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 MIR378C-201ENST00000578683 81 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 SNRPGP15-201ENST00000600149 222 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC105254.2-201ENST00000603636 436 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC005344.1-201ENST00000613391 459 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 MRPL57P3-201ENST00000619218 176 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.13□□□□□ -1.59
CITED4Q96RK1 AC073488.3-201ENST00000631611 778 ntBASIC5.13□□□□□ -1.59
CITED4Q96RK1 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CITED4Q96RK1 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CITED4Q96RK1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CITED4Q96RK1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CITED4Q96RK1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CITED4Q96RK1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CITED4Q96RK1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CITED4Q96RK1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CITED4Q96RK1 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CITED4Q96RK1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CITED4Q96RK1 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CITED4Q96RK1 RN7SKP171-201ENST00000364417 303 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 RN7SKP269-201ENST00000365545 319 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CITED4Q96RK1 MIR188-201ENST00000385034 86 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 RNA5SP155-201ENST00000411154 129 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CITED4Q96RK1 AC008267.5-201ENST00000424928 265 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 AHCYP8-201ENST00000425108 209 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 AC245291.3-201ENST00000443400 292 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 RPL23AP31-201ENST00000456160 467 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 AC087588.1-201ENST00000462203 316 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 AC008571.1-201ENST00000467232 300 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 HMGB1P30-201ENST00000492455 606 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 TOMM22P4-201ENST00000511318 336 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 RNA5SP318-201ENST00000516352 92 ntBASIC5.12□□□□□ -1.59
CITED4Q96RK1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.12□□□□□ -1.59
CITED4Q96RK1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms