Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC091390.3-201ENST00000426478 338 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AC005229.2-201ENST00000456995 399 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 VN1R17P-201ENST00000472048 1090 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 KLHL2P1-201ENST00000508691 521 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 TXNP6-201ENST00000510190 310 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 SUMO2P20-201ENST00000520803 283 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 RPL21P12-201ENST00000559810 515 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 APOOP1-201ENST00000604695 592 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AL022345.1-201ENST00000607292 135 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AC079597.1-201ENST00000624306 508 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AC083843.2-201ENST00000568248 6253 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-1309P-201ENST00000363305 108 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 RNU4-48P-201ENST00000365559 182 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 SNORA22B-201ENST00000383876 138 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-1106P-201ENST00000390845 107 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AL445189.1-201ENST00000405722 338 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 RNU2-22P-201ENST00000411266 212 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AC114755.2-201ENST00000413520 361 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AC113618.1-201ENST00000416747 285 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 RPS20P5-201ENST00000434808 360 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 CYCSP24-201ENST00000445119 316 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 GMFBP1-201ENST00000467831 427 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AK3P4-201ENST00000504283 583 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AC021146.1-201ENST00000511202 716 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 RNA5SP392-201ENST00000516905 112 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 SNORA25.17-201ENST00000517184 124 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 RPL7P20-201ENST00000520308 745 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AP003072.2-201ENST00000527756 676 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AC024224.1-201ENST00000538284 609 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AC128657.1-201ENST00000549459 145 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AC106785.1-201ENST00000565935 262 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AC018552.3-201ENST00000567416 561 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 POLR3GP2-201ENST00000588366 668 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 VN1R85P-201ENST00000601587 426 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 DPPA3P3-201ENST00000603842 430 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 AL359757.2-201ENST00000624309 274 ntBASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SYNGAP1Q96PV0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 Y_RNA.100-201ENST00000363141 102 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 SNORD116-29-201ENST00000384516 83 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 MIR137-201ENST00000385223 102 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AL606923.1-201ENST00000406616 190 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 RNU2-39P-201ENST00000410604 198 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AL450023.3-201ENST00000440592 271 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 SCARNA22-201ENST00000503991 125 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 Y_RNA.682-201ENST00000516457 100 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms