Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.06□□□□□ -2.08
CFAP54Q96N23 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.06□□□□□ -2.08
CFAP54Q96N23 HMGN2P47-201ENST00000559378 272 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 AL122125.1-201ENST00000616999 600 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CFAP54Q96N23 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CFAP54Q96N23 TOMM22P6-201ENST00000465035 409 ntBASIC2.05□□□□□ -2.08
CFAP54Q96N23 AC012182.1-201ENST00000570133 895 ntBASIC2.05□□□□□ -2.08
CFAP54Q96N23 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.05□□□□□ -2.08
CFAP54Q96N23 AC092185.1-201ENST00000491371 97 ntBASIC2.05□□□□□ -2.08
CFAP54Q96N23 RNA5SP182-201ENST00000516064 82 ntBASIC2.05□□□□□ -2.08
CFAP54Q96N23 RNA5SP76-201ENST00000516277 87 ntBASIC2.05□□□□□ -2.08
CFAP54Q96N23 AP001207.1-201ENST00000524051 481 ntBASIC2.05□□□□□ -2.08
CFAP54Q96N23 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.05□□□□□ -2.08
CFAP54Q96N23 RPL21P5-201ENST00000554662 472 ntBASIC2.05□□□□□ -2.08
CFAP54Q96N23 AC110588.1-201ENST00000559699 137 ntBASIC2.05□□□□□ -2.08
CFAP54Q96N23 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.05□□□□□ -2.08
CFAP54Q96N23 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CFAP54Q96N23 AC009831.4-201ENST00000620744 325 ntBASIC2.05□□□□□ -2.08
CFAP54Q96N23 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CFAP54Q96N23 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CFAP54Q96N23 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CFAP54Q96N23 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC007182.2-201ENST00000489251 402 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 RN7SKP60-201ENST00000516985 239 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 MIR4255-201ENST00000579351 72 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 BX664608.1-201ENST00000610519 487 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AL133412.1-201ENST00000380194 2992 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 Y_RNA.458-201ENST00000384240 102 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 RPS29P12-201ENST00000460178 152 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 LINC00888-204ENST00000487386 421 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC008526.1-201ENST00000509149 338 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.04□□□□□ -2.08
CFAP54Q96N23 OR4R2P-201ENST00000530815 597 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.04□□□□□ -2.08
CFAP54Q96N23 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CFAP54Q96N23 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC034244.1-201ENST00000507687 207 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.04□□□□□ -2.08
CFAP54Q96N23 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.04□□□□□ -2.08
CFAP54Q96N23 HIGD1AP10-201ENST00000527837 282 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC025260.1-201ENST00000548858 430 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.04□□□□□ -2.08
CFAP54Q96N23 MIR4644-201ENST00000579929 84 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 HMGN2P28-201ENST00000606102 262 ntBASIC2.04□□□□□ -2.08
CFAP54Q96N23 AC008264.2-201ENST00000610193 3731 ntBASIC2.03□□□□□ -2.08
CFAP54Q96N23 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
CFAP54Q96N23 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.03□□□□□ -2.08
CFAP54Q96N23 IGKV2D-36-201ENST00000518643 226 ntBASIC2.03□□□□□ -2.08
CFAP54Q96N23 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.03□□□□□ -2.08
CFAP54Q96N23 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CFAP54Q96N23 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CFAP54Q96N23 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CFAP54Q96N23 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CFAP54Q96N23 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CFAP54Q96N23 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.03□□□□□ -2.08
CFAP54Q96N23 HMGB1P1-201ENST00000522557 636 ntBASIC2.03□□□□□ -2.08
CFAP54Q96N23 AL512598.1-201ENST00000610158 273 ntBASIC2.03□□□□□ -2.08
CFAP54Q96N23 AC026523.2-201ENST00000625039 7739 ntBASIC2.03□□□□□ -2.09
CFAP54Q96N23 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CFAP54Q96N23 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CFAP54Q96N23 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 AL353597.2-202ENST00000434901 373 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 AC093591.3-201ENST00000634516 308 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 AL356806.1-201ENST00000422524 916 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 HMGB1P27-201ENST00000431429 603 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 HMGB1P31-201ENST00000437242 427 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 ATP5EP1-201ENST00000510257 156 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 AP005660.1-201ENST00000522972 293 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CFAP54Q96N23 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CFAP54Q96N23 OR5H15-201ENST00000383696 930 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 RPL7P37-201ENST00000425095 738 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 HSPE1P28-201ENST00000443139 211 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.02□□□□□ -2.09
CFAP54Q96N23 AL645944.1-201ENST00000603857 493 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 CYP3A51P-201ENST00000633513 256 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 MIR7153-201ENST00000637758 57 ntBASIC2.02□□□□□ -2.09
CFAP54Q96N23 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
CFAP54Q96N23 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CFAP54Q96N23 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CFAP54Q96N23 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.01□□□□□ -2.09
CFAP54Q96N23 MIR598-201ENST00000384868 97 ntBASIC2.01□□□□□ -2.09
CFAP54Q96N23 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
CFAP54Q96N23 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.01□□□□□ -2.09
CFAP54Q96N23 AP003467.2-201ENST00000520175 319 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms