Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LINC00477Q96M19 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
LINC00477Q96M19 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 SNORA51.12-201ENST00000384448 134 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 MIR513B-201ENST00000385136 84 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 SNORD17-201ENST00000390930 237 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 ERHP2-201ENST00000402323 299 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LINC00477Q96M19 RNU6ATAC-201ENST00000408749 126 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 RNU2-42P-201ENST00000410697 113 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC007899.1-201ENST00000412776 775 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 RAD23BP2-201ENST00000416003 1207 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 MTCO3P12-201ENST00000416718 547 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 YPEL5P1-201ENST00000419731 367 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 ATP5JP1-201ENST00000431631 322 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL035246.1-201ENST00000433554 1255 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC007389.2-201ENST00000434630 306 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 RPL21P23-201ENST00000446654 460 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC004022.1-201ENST00000447766 1066 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 ZNF886P-201ENST00000450781 723 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC104073.1-201ENST00000451988 151 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 NDUFA5P7-201ENST00000452914 242 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 DUXAP8-207ENST00000456786 622 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC068587.1-201ENST00000483613 781 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC114967.1-201ENST00000504890 259 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 MTCO3P44-201ENST00000510977 541 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AP001317.1-201ENST00000531194 960 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL157394.1-201ENST00000562983 1224 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC106785.1-201ENST00000565935 262 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 MIR4506-201ENST00000584693 77 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL162713.1-201ENST00000604480 262 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC091946.2-201ENST00000606105 291 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 DUXAP10-204ENST00000612052 616 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AL157817.1-201ENST00000614264 790 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC105227.2-201ENST00000615075 605 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC243312.2-201ENST00000623340 601 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC091903.1-201ENST00000624322 454 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.46□□□□□ -2.02
LINC00477Q96M19 AC091564.4-201ENST00000533934 2194 ntBASIC2.46□□□□□ -2.02
LINC00477Q96M19 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC004972.1-201ENST00000623934 2209 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00477Q96M19 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00477Q96M19 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 RNU6-251P-201ENST00000363235 104 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 RNU5D-1-201ENST00000363299 116 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 RNU6-263P-201ENST00000363811 107 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 MIR218-2-201ENST00000385006 110 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 RNA5SP80-201ENST00000410475 111 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 MTCO1P3-201ENST00000429327 192 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AL589880.1-201ENST00000448271 287 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 RPS26P21-201ENST00000475397 348 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 OR4G11P-201ENST00000492842 939 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC114322.1-201ENST00000506771 926 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00477Q96M19 KLHL2P1-201ENST00000508691 521 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 RNY4P37-201ENST00000516225 96 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC023632.4-201ENST00000517783 191 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 MRPS36P3-201ENST00000519284 130 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC022690.1-201ENST00000526681 550 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms