Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 AC140134.1-201ENST00000511830 3544 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 HSPE1P11-201ENST00000339579 310 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 RNA5SP453-201ENST00000362503 119 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 Y_RNA.269-201ENST00000364685 89 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 Y_RNA.314-201ENST00000365114 102 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 RNU6-744P-201ENST00000365557 107 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 RNU6-1316P-201ENST00000384242 108 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 SNORD20-201ENST00000384550 80 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 MTATP6P16-201ENST00000434543 526 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 GLUD1P3-202ENST00000508551 200 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 AC021146.3-201ENST00000511911 260 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 RNU6-397P-201ENST00000516226 104 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 RNA5SP503-201ENST00000517047 117 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 HMGB1P40-201ENST00000525121 540 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 AC090517.1-201ENST00000569307 266 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 RNU6-84P-201ENST00000607737 102 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 ZNF72P-201ENST00000425869 1908 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 AC046144.1-201ENST00000478559 1853 ntBASIC6.34□□□□□ -1.39
TRIM47Q96LD4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
TRIM47Q96LD4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
TRIM47Q96LD4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TRIM47Q96LD4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 RN7SKP104-201ENST00000362605 328 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 Y_RNA.54-201ENST00000362766 105 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 SNORA22C-201ENST00000384614 134 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 MIR450B-201ENST00000401182 78 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AL133388.1-201ENST00000404509 287 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AC093655.2-201ENST00000425735 631 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AC002381.1-201ENST00000447049 280 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 RPL29P29-201ENST00000448725 423 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AL162388.1-201ENST00000450912 352 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 MTCO3P8-201ENST00000453691 755 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 RN7SL738P-201ENST00000470264 297 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AL049830.2-201ENST00000480072 201 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 IGLV2-34-201ENST00000490007 283 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AC083829.1-201ENST00000503756 657 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 RPL21P12-201ENST00000559810 515 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 RPL10P14-201ENST00000565265 298 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AC006600.1-201ENST00000572529 153 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 MIR3146-201ENST00000580367 79 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 MIR4311-201ENST00000580794 100 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AP001282.2-201ENST00000616149 309 ntBASIC6.33□□□□□ -1.4
TRIM47Q96LD4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM47Q96LD4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AC104964.3-201ENST00000606115 2860 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 SNORA51.8-201ENST00000384234 132 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AL603910.2-201ENST00000407268 136 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 Y_RNA.629-201ENST00000411368 105 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 COX6CP10-201ENST00000416832 224 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms