Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RWDD4P2-201ENST00000426392 563 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX27Q96L92 RPS6P12-201ENST00000432491 726 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 TPTE2P5-203ENST00000458118 728 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 AC025518.1-201ENST00000479856 347 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 OR5H5P-201ENST00000503164 928 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 AC021678.1-201ENST00000505195 936 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX27Q96L92 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX27Q96L92 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX27Q96L92 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX27Q96L92 AC034159.1-201ENST00000513885 583 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX27Q96L92 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX27Q96L92 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX27Q96L92 OR5AP1P-201ENST00000529730 940 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX27Q96L92 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX27Q96L92 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX27Q96L92 AC103987.3-201ENST00000582071 292 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 MIR544B-201ENST00000582372 78 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 PRELID3BP8-201ENST00000604148 295 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 AC010680.4-201ENST00000605334 543 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 AL451064.1-201ENST00000607718 471 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX27Q96L92 MIR4727-201ENST00000622232 55 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX27Q96L92 AC025048.6-202ENST00000627667 438 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 AC090582.1-201ENST00000636321 199 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX27Q96L92 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SNX27Q96L92 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX27Q96L92 AC090229.1-201ENST00000590983 1609 ntBASIC4.46□□□□□ -1.69
SNX27Q96L92 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SNX27Q96L92 AC097504.1-201ENST00000515103 2415 ntBASIC4.46□□□□□ -1.69
SNX27Q96L92 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SNX27Q96L92 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
SNX27Q96L92 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SNX27Q96L92 RNU6-28P-201ENST00000362378 107 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 Y_RNA.238-201ENST00000364441 102 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 RNU6-343P-201ENST00000364709 104 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 Y_RNA.553-201ENST00000384670 102 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 RNY3P10-201ENST00000384764 102 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SNX27Q96L92 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX27Q96L92 AC005517.2-201ENST00000424673 553 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 NANOGP6-201ENST00000429190 847 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX27Q96L92 NOTCH2P1-201ENST00000443481 624 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 SUMO2P2-201ENST00000456482 255 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 RPL36AP13-201ENST00000457490 317 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 RNU6-956P-201ENST00000458868 103 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 RPL38P1-201ENST00000460914 211 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX27Q96L92 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX27Q96L92 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX27Q96L92 Y_RNA.655-201ENST00000515919 96 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 IGLV3-26-201ENST00000520756 302 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX27Q96L92 AC091489.2-201ENST00000566263 604 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 AC006362.1-201ENST00000567392 174 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX27Q96L92 AP001180.3-201ENST00000582221 145 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 MIR5684-201ENST00000585074 65 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 AC112187.2-201ENST00000604345 283 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 AC068276.1-201ENST00000605793 379 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 AL390208.1-201ENST00000605885 644 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 AC064801.1-201ENST00000612025 407 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 HULC.1-201ENST00000612720 240 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX27Q96L92 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SNX27Q96L92 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX27Q96L92 MTCO1P12-201ENST00000414273 1543 ntBASIC4.46□□□□□ -1.7
SNX27Q96L92 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX27Q96L92 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX27Q96L92 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SNX27Q96L92 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
SNX27Q96L92 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX27Q96L92 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX27Q96L92 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX27Q96L92 CEP170P1-201ENST00000502249 4587 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 GNG5P1-201ENST00000255500 204 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 RNU5F-6P-201ENST00000362979 116 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 RNU6-339P-201ENST00000384310 107 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX27Q96L92 HSPE1P12-201ENST00000412576 301 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX27Q96L92 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX27Q96L92 RPL37P21-201ENST00000435890 276 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX27Q96L92 RPL23AP89-201ENST00000439324 255 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 RPL23AP33-201ENST00000442301 452 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.45□□□□□ -1.7
SNX27Q96L92 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX27Q96L92 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms