Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SNORA4.1-201ENST00000364263 144 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 RNY3P9-201ENST00000384727 106 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AL136116.1-201ENST00000403591 381 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 RNU2-47P-201ENST00000410649 186 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 Z97055.1-201ENST00000419730 712 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC002381.1-201ENST00000447049 280 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 SBDSP1-204ENST00000453858 737 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC093278.1-201ENST00000494700 600 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 TXNP6-201ENST00000510190 310 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 RNA5SP216-201ENST00000516111 123 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC022695.1-201ENST00000522089 237 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 YPEL5P3-201ENST00000547227 352 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 TGIF1P1-201ENST00000558095 802 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AL354943.1-201ENST00000572103 781 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 MIR4284-201ENST00000578924 81 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 DUXAP11-201ENST00000603858 526 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AL358072.1-201ENST00000604156 575 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFT1Q96AA3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC017037.3-201ENST00000625016 472 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 AP003399.1-201ENST00000637534 361 ntBASIC3.3□□□□□ -1.88
RFT1Q96AA3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFT1Q96AA3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AC007496.3-201ENST00000624987 3443 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFT1Q96AA3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 RNA5SP443-201ENST00000363083 132 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 PIGPP2-201ENST00000411569 458 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC016769.2-201ENST00000414815 475 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AL365338.1-201ENST00000422282 858 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 MTCO1P39-201ENST00000426148 480 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC006989.1-201ENST00000427212 131 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AL158071.1-201ENST00000430315 461 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 EEF1E1P1-201ENST00000446998 430 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 MEMO1P3-201ENST00000459811 302 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 RPL21P11-201ENST00000461458 483 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 KLHL2P1-201ENST00000508691 521 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 RNA5SP468-201ENST00000516782 93 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFT1Q96AA3 OR6C7P-201ENST00000547875 934 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC120057.2-201ENST00000571520 271 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC245008.1-201ENST00000608123 476 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms