Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.16□□□□□ -1.58
RTF1Q92541 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.16□□□□□ -1.58
RTF1Q92541 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RTF1Q92541 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RTF1Q92541 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RTF1Q92541 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RTF1Q92541 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.15□□□□□ -1.58
RTF1Q92541 RPL23AP57-201ENST00000332361 466 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 RNU6-777P-201ENST00000364265 104 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 RN7SKP226-201ENST00000364912 300 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 AL359837.1-201ENST00000381357 287 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 SNORA51.6-201ENST00000384151 125 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 MIR181A1-201ENST00000385026 110 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 MIR548F1-201ENST00000408667 84 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 TPMTP2-201ENST00000414372 726 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.15□□□□□ -1.59
RTF1Q92541 RPL36P19-201ENST00000430744 301 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.15□□□□□ -1.59
RTF1Q92541 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.15□□□□□ -1.59
RTF1Q92541 UBE2V1P8-201ENST00000437166 265 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 SKP1P1-201ENST00000438081 489 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 RBMX2P4-201ENST00000441256 376 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 TRBV26-201ENST00000456572 344 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 OR6K1P-201ENST00000456766 971 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 RPL5P30-201ENST00000465511 891 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.15□□□□□ -1.59
RTF1Q92541 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
RTF1Q92541 AC091133.4-201ENST00000511142 308 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.15□□□□□ -1.59
RTF1Q92541 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.15□□□□□ -1.59
RTF1Q92541 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.15□□□□□ -1.59
RTF1Q92541 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.15□□□□□ -1.59
RTF1Q92541 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.15□□□□□ -1.59
RTF1Q92541 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.15□□□□□ -1.59
RTF1Q92541 NF1P5-201ENST00000588287 448 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.15□□□□□ -1.59
RTF1Q92541 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.15□□□□□ -1.59
RTF1Q92541 AC090578.1-201ENST00000604955 591 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 AC080013.4-201ENST00000607624 649 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.15□□□□□ -1.59
RTF1Q92541 AC104010.1-201ENST00000616889 150 ntBASIC5.15□□□□□ -1.59
RTF1Q92541 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.15□□□□□ -1.59
RTF1Q92541 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.15□□□□□ -1.59
RTF1Q92541 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.15□□□□□ -1.59
RTF1Q92541 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RTF1Q92541 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RTF1Q92541 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RTF1Q92541 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RTF1Q92541 RNA5SP52-201ENST00000362448 134 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 Y_RNA.248-201ENST00000364501 109 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 SNORA3.3-201ENST00000408712 125 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 RNU6-603P-201ENST00000411403 107 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AL160275.2-201ENST00000412010 394 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.14□□□□□ -1.59
RTF1Q92541 BX890604.2-201ENST00000427883 474 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AL445584.1-201ENST00000431451 330 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.14□□□□□ -1.59
RTF1Q92541 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.14□□□□□ -1.59
RTF1Q92541 RPL23AP74-201ENST00000437246 471 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 PGBD4P3-201ENST00000440731 581 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 MTND5P14-201ENST00000441481 1267 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.14□□□□□ -1.59
RTF1Q92541 RPL7P36-201ENST00000444633 681 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.14□□□□□ -1.59
RTF1Q92541 AL590365.1-201ENST00000450788 243 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 RPL30P11-201ENST00000495304 339 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.14□□□□□ -1.59
RTF1Q92541 AC024589.1-201ENST00000512207 263 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RTF1Q92541 AC022483.1-201ENST00000514020 567 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.14□□□□□ -1.59
RTF1Q92541 OR5AP1P-201ENST00000529730 940 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.14□□□□□ -1.59
RTF1Q92541 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.14□□□□□ -1.59
RTF1Q92541 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.14□□□□□ -1.59
RTF1Q92541 AL133457.1-201ENST00000564251 987 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 MAGOH2P-202ENST00000584384 429 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 BCRP9-201ENST00000605312 388 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AC098614.4-201ENST00000607601 462 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AC015813.4-201ENST00000610469 179 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AC008250.2-201ENST00000615261 205 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.14□□□□□ -1.59
RTF1Q92541 AL773545.4-201ENST00000637262 310 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 AL513478.4-201ENST00000641636 310 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 OR5H6-203ENST00000642105 978 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.14□□□□□ -1.59
RTF1Q92541 AC011266.1-201ENST00000624119 3569 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 OR11H5P-202ENST00000641612 1325 ntBASIC5.14□□□□□ -1.59
RTF1Q92541 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.14□□□□□ -1.59
RTF1Q92541 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.14□□□□□ -1.59
RTF1Q92541 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTF1Q92541 PHKBP1-201ENST00000450951 1951 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RTF1Q92541 RNU6-533P-201ENST00000384144 107 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 RNU6-769P-201ENST00000384407 104 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 RNU6-952P-201ENST00000391164 108 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 ARF4P3-201ENST00000397387 509 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 EIF5P1-201ENST00000400019 1231 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms