Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 RN7SKP280-201ENST00000364196 304 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 SNORD3H-201ENST00000384486 214 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AL031679.1-201ENST00000400616 525 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AL445189.1-201ENST00000405722 338 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 RNA5SP129-201ENST00000410276 118 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AL139247.1-201ENST00000422768 325 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AL591419.1-201ENST00000427423 339 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 MUPP-201ENST00000438111 566 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 HMGB3P11-201ENST00000440127 604 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 MTND3P1-201ENST00000441336 220 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC097493.1-201ENST00000463958 372 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 ST13P14-201ENST00000474095 734 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 RN7SL323P-201ENST00000494712 295 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 MTND4LP31-201ENST00000514859 294 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 RNA5SP468-201ENST00000516782 93 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AP001372.4-201ENST00000524889 472 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 HIGD1AP10-201ENST00000527837 282 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC093227.2-201ENST00000589357 285 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 VN1R78P-201ENST00000597393 564 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC004987.4-201ENST00000603383 338 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AL158042.1-201ENST00000605338 460 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC107294.3-201ENST00000609211 526 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 PLCE1P1-201ENST00000622094 305 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AP003355.3-201ENST00000623465 114 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AL136164.4-201ENST00000625013 2135 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC005539.1-201ENST00000443768 1479 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AP000776.1-201ENST00000530032 1663 ntBASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.45□□□□□ -1.86
CKAP2Q8WWK9 AL356473.1-201ENST00000406203 1408 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 MTND5P27-201ENST00000428871 1720 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 ZNF876P-202ENST00000398732 1485 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 RNU6-50P-201ENST00000362356 103 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 ARF4P2-201ENST00000430209 526 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AL590103.1-201ENST00000434488 307 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 MTCYBP45-201ENST00000435243 565 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 Z82190.1-201ENST00000454534 490 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 RNU7-136P-201ENST00000458819 69 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 RPL7P18-201ENST00000478965 734 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC096751.1-202ENST00000502691 1067 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 RNU6-1095P-201ENST00000516148 108 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 RNU6-150P-201ENST00000516237 95 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 RNU1-143P-201ENST00000516296 146 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 RNA5SP380-201ENST00000517190 98 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC245166.1-201ENST00000521012 253 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 DEFB131D-201ENST00000526803 184 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 SNORD84-203ENST00000584275 78 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC067852.3-201ENST00000589177 561 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC245297.2-201ENST00000610119 565 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 U1.23-201ENST00000610293 146 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC092106.3-201ENST00000611308 722 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 RNU1-68P-201ENST00000615382 146 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AP000484.1-201ENST00000620067 1252 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 U1.39-201ENST00000621562 146 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC017071.1-201ENST00000564407 2204 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC097714.1-201ENST00000511272 1647 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AC032011.1-201ENST00000611703 1549 ntBASIC3.44□□□□□ -1.86
CKAP2Q8WWK9 AL022578.1-201ENST00000439330 1433 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms