Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AC244517.1-201ENST00000606030 2086 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 SNORA60-201ENST00000362396 134 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 RNU6-1249P-201ENST00000363237 111 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 Y_RNA.359-201ENST00000365498 102 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 RPS20P2-201ENST00000402520 389 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 Y_RNA.608-201ENST00000410647 95 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 RNU2-47P-201ENST00000410649 186 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 RN7SKP167-201ENST00000411047 285 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AL663109.1-201ENST00000411498 844 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AL359704.1-201ENST00000411586 781 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AC007899.1-201ENST00000412776 775 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 TBCAP1-201ENST00000436520 327 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 RPS20P32-201ENST00000456044 356 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 CFTRP1-201ENST00000456646 183 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 SNORD121B-201ENST00000458838 81 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 SNORD42A-201ENST00000459584 64 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 OR9M1P-201ENST00000459641 921 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AC012170.1-201ENST00000495139 359 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 RPL29P14-201ENST00000495837 428 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 ZNF519P3-201ENST00000557158 1032 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 MIR6868-201ENST00000611215 58 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AL590099.1-201ENST00000615276 138 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AL138721.1-201ENST00000616756 179 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 MTND5P33-201ENST00000571250 1450 ntBASIC4.11□□□□□ -1.75
HMGB4Q8WW32 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGB4Q8WW32 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 RNA5SP124-201ENST00000362739 110 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 RNA5SP387-201ENST00000364226 106 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 VDAC1P9-201ENST00000412766 841 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 MTCO3P41-201ENST00000414801 328 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 MTND4LP10-201ENST00000435146 291 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AL031667.1-201ENST00000440222 725 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC092641.1-201ENST00000440229 772 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 PDSS1P2-201ENST00000449397 678 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 ABCF2P2-201ENST00000450549 296 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AP1S2P1-201ENST00000457344 379 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 RPL23AP65-201ENST00000475608 468 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 STMN1P2-201ENST00000508435 439 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC017037.2-201ENST00000513850 890 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms