Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AL513185.3-201ENST00000433335 1300 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF139Q8WU17 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF139Q8WU17 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF139Q8WU17 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF139Q8WU17 RNU6-549P-201ENST00000384433 107 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 RPL7P25-201ENST00000404151 721 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 U3.42-201ENST00000408746 214 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.24□□□□□ -1.89
RNF139Q8WU17 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF139Q8WU17 MTCO1P39-201ENST00000426148 480 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 RPS12P18-201ENST00000442381 270 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 AC016696.1-201ENST00000446949 318 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 AC125238.1-201ENST00000448842 249 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 AC015908.1-201ENST00000478739 476 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 KCTD9P5-201ENST00000504141 1170 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 AC011352.3-201ENST00000505162 593 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 RNU6-1095P-201ENST00000516148 108 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 SNORA74D-201ENST00000516404 141 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 RN7SKP282-201ENST00000516824 299 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 OR4P1P-201ENST00000530808 1136 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 AP002404.1-201ENST00000532005 451 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF139Q8WU17 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF139Q8WU17 AC093519.1-201ENST00000566109 298 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 MIR3200-201ENST00000580767 85 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.24□□□□□ -1.89
RNF139Q8WU17 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF139Q8WU17 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF139Q8WU17 AP006248.3-201ENST00000623580 594 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF139Q8WU17 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF139Q8WU17 MFSD8-245ENST00000641743 948 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF139Q8WU17 AC004972.1-201ENST00000623934 2209 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF139Q8WU17 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF139Q8WU17 AL353743.1-202ENST00000431724 1695 ntBASIC3.24□□□□□ -1.89
RNF139Q8WU17 API5P2-201ENST00000397055 1498 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 AC009487.2-201ENST00000420969 6821 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF139Q8WU17 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF139Q8WU17 RNU6-251P-201ENST00000363235 104 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 RNA5SP139-201ENST00000364340 117 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 AL138885.1-201ENST00000405921 675 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 RNA5SP293-201ENST00000410527 113 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF139Q8WU17 AC246680.2-201ENST00000422106 389 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 AC241584.1-201ENST00000438469 1241 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 CYCSP32-201ENST00000440548 321 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 AL050341.1-201ENST00000447743 313 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 RPL27AP5-201ENST00000469428 449 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 AC112518.2-201ENST00000508565 425 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 RNU6-1102P-201ENST00000516149 96 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 SNRPGP1-201ENST00000553864 222 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF139Q8WU17 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF139Q8WU17 DUXAP4-201ENST00000603046 613 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF139Q8WU17 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF139Q8WU17 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF139Q8WU17 AC091953.5-201ENST00000622919 233 ntBASIC3.23□□□□□ -1.89
RNF139Q8WU17 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF139Q8WU17 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF139Q8WU17 AP003122.5-201ENST00000527668 3766 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 SNORA71.1-201ENST00000364523 117 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 CD24P4-201ENST00000382840 243 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 SNORD51-201ENST00000384320 80 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 SNORD67-201ENST00000390833 111 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AL136372.1-201ENST00000403060 228 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 RPS15AP6-201ENST00000420703 385 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC079780.1-201ENST00000428259 207 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 HMGB3P6-201ENST00000444896 598 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 OR6K5P-201ENST00000447050 945 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC093278.1-201ENST00000494700 600 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC006390.1-201ENST00000508068 283 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC008885.1-201ENST00000514930 301 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 RNA5SP341-201ENST00000516261 117 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 MED28P6-201ENST00000558776 231 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC006539.2-201ENST00000601729 572 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC012669.1-201ENST00000603209 283 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC002487.1-201ENST00000604565 994 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC106900.2-201ENST00000604994 317 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 AC018816.2-201ENST00000621460 353 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 AL353748.2-201ENST00000622148 471 ntBASIC3.22□□□□□ -1.89
RNF139Q8WU17 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF139Q8WU17 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms