Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCHCR1Q8TD31 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCHCR1Q8TD31 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCHCR1Q8TD31 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.6□□□□□ -1.67
CCHCR1Q8TD31 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCHCR1Q8TD31 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.6□□□□□ -1.67
CCHCR1Q8TD31 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RNY4P14-201ENST00000363656 96 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RNU6-1207P-201ENST00000384343 107 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RPL23AP32-201ENST00000395315 459 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 CCNG1P1-201ENST00000406783 885 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 SNORA11B-201ENST00000408175 129 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RBMY1KP-201ENST00000423480 476 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC008065.1-201ENST00000428525 348 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RPL7P28-201ENST00000437739 740 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL049734.2-201ENST00000441066 616 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 ARL2BPP10-201ENST00000446487 531 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL359893.1-201ENST00000447628 1580 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC132479.1-201ENST00000449160 144 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RPL7P52-201ENST00000449200 742 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 CEACAMP6-201ENST00000452007 574 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL592156.1-201ENST00000508758 304 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC009646.1-201ENST00000510455 318 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC010342.1-201ENST00000514047 877 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 OR5AQ1P-201ENST00000527596 927 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC118273.2-201ENST00000532092 465 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 MIR548S-201ENST00000581352 82 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 MIR3118-1-201ENST00000581787 76 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC006504.3-201ENST00000586818 523 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 DHX40P1-201ENST00000588725 1412 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 YWHAQP7-201ENST00000603536 658 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AC067959.1-201ENST00000604334 379 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 Z98200.1-201ENST00000607298 470 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL355472.4-201ENST00000610233 626 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 AL590282.1-201ENST00000610379 1136 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RN7SL722P-201ENST00000617780 284 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 RN7SL565P-201ENST00000618246 284 ntBASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.59□□□□□ -1.67
CCHCR1Q8TD31 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCHCR1Q8TD31 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCHCR1Q8TD31 AC018555.1-201ENST00000567548 1980 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 U3.29-201ENST00000391296 212 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 CYB5AP4-201ENST00000396692 399 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 AC004987.3-201ENST00000413879 771 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 AC127526.1-201ENST00000417526 366 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 RPS12P10-201ENST00000427031 377 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 MTCO2P11-201ENST00000431069 680 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 NEK4P1-201ENST00000433383 879 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 AC104850.1-201ENST00000435940 476 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 AC108734.1-201ENST00000439549 399 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 AL512326.1-201ENST00000443050 721 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 RPS4XP4-201ENST00000443195 763 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 FABP3P2-201ENST00000453169 399 ntBASIC4.58□□□□□ -1.68
CCHCR1Q8TD31 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms