Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LMO3Q8TAP4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.84□□□□□ -1.79
LMO3Q8TAP4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.84□□□□□ -1.79
LMO3Q8TAP4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.84□□□□□ -1.79
LMO3Q8TAP4 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO3Q8TAP4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO3Q8TAP4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.84□□□□□ -1.79
LMO3Q8TAP4 AC091489.2-201ENST00000566263 604 ntBASIC3.84□□□□□ -1.79
LMO3Q8TAP4 AP001004.1-201ENST00000582468 324 ntBASIC3.84□□□□□ -1.79
LMO3Q8TAP4 AC091135.1-201ENST00000585943 307 ntBASIC3.84□□□□□ -1.79
LMO3Q8TAP4 AC083760.1-201ENST00000589621 670 ntBASIC3.84□□□□□ -1.79
LMO3Q8TAP4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.84□□□□□ -1.79
LMO3Q8TAP4 AL357559.1-201ENST00000622228 274 ntBASIC3.84□□□□□ -1.79
LMO3Q8TAP4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
LMO3Q8TAP4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LMO3Q8TAP4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
LMO3Q8TAP4 CEP170P1-201ENST00000502249 4587 ntBASIC3.84□□□□□ -1.8
LMO3Q8TAP4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LMO3Q8TAP4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.84□□□□□ -1.8
LMO3Q8TAP4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
LMO3Q8TAP4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
LMO3Q8TAP4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC016716.1-201ENST00000265882 708 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 RPL21P17-201ENST00000397467 475 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AL450338.1-201ENST00000407987 512 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC073069.1-201ENST00000428657 441 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 MTND4P25-201ENST00000441039 533 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AL671855.1-201ENST00000446875 1203 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 RPS3AP46-201ENST00000448352 682 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 NF1P3-201ENST00000457709 450 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 RN7SL594P-201ENST00000470590 287 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 TMED11P-201ENST00000479478 690 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC023424.2-201ENST00000493479 777 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC008549.1-201ENST00000512900 643 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 RN7SKP298-201ENST00000515950 94 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 SNORA48.10-201ENST00000516965 160 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 RN7SKP283-201ENST00000517197 270 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC027309.2-201ENST00000520566 192 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC018442.3-201ENST00000523025 183 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC239860.2-201ENST00000525886 270 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 SLC2A13P1-201ENST00000531560 322 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC093519.1-201ENST00000566109 298 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC092325.1-201ENST00000566449 554 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AL022154.1-201ENST00000604698 785 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 RNU6-88P-201ENST00000606801 100 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AF250324.2-201ENST00000608299 610 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC006566.1-201ENST00000608943 513 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 uc_338.9-201ENST00000617424 182 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC009704.2-201ENST00000618739 483 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC022149.2-201ENST00000621061 203 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AC112200.1-201ENST00000625015 234 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 OR5BR1P-201ENST00000524992 1330 ntBASIC3.83□□□□□ -1.8
LMO3Q8TAP4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO3Q8TAP4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 ZNF37BP-203ENST00000452306 1352 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RNU6-251P-201ENST00000363235 104 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RNA5SP235-201ENST00000365411 114 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RNU6-723P-201ENST00000383973 107 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RNU6-297P-201ENST00000384636 107 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 Y_RNA.554-201ENST00000384672 102 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RPL17P12-201ENST00000413391 526 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 IPMKP1-201ENST00000425988 855 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 MTCO2P19-201ENST00000427513 598 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms