Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 MAPK10-263ENST00000641052 4307 ntBASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH19Q8TAB3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RNU6-398P-201ENST00000384143 109 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RNU6-1068P-201ENST00000410958 103 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RN7SKP100-201ENST00000411258 284 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC016397.1-201ENST00000412463 242 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 FAR2P2-201ENST00000413041 594 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 MTCO3P12-201ENST00000416718 547 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 FAR2P4-202ENST00000425399 584 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AL138785.1-201ENST00000425821 331 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC011753.3-201ENST00000443436 406 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC073264.2-201ENST00000448886 166 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RPS27AP17-201ENST00000463344 455 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RPL37P6-202ENST00000464216 403 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC078785.3-201ENST00000476607 425 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RNU2-10P-201ENST00000516375 211 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RNU6-798P-201ENST00000516912 103 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 RN7SKP234-201ENST00000517173 224 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC107918.3-201ENST00000533272 382 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 GLYCAM1-201ENST00000546596 285 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC209154.1-201ENST00000582156 337 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AC018638.8-201ENST00000588755 281 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AL391358.1-201ENST00000605342 190 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 AP000346.3-201ENST00000622821 210 ntBASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PCDH19Q8TAB3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
PCDH19Q8TAB3 AL136164.3-201ENST00000624429 3978 ntBASIC4.84□□□□□ -1.64
PCDH19Q8TAB3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PCDH19Q8TAB3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC092326.2-201ENST00000624772 1561 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC027287.1-201ENST00000553115 1453 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 DHX40P1-201ENST00000588725 1412 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 NACAP2-201ENST00000318548 624 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 Y_RNA.142-201ENST00000363491 102 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 Y_RNA.255-201ENST00000364581 97 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 Y_RNA.813-201ENST00000364639 102 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 RNA5SP505-201ENST00000364748 108 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 RNU4-48P-201ENST00000365559 182 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 RNU6-821P-201ENST00000390995 107 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AL591416.1-201ENST00000404015 867 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AL354719.1-201ENST00000406535 843 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC005154.2-201ENST00000438110 379 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC009220.1-201ENST00000451614 275 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC006967.1-201ENST00000467608 589 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AL163973.1-201ENST00000484753 577 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC025164.1-201ENST00000496249 478 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 HSPD1P15-201ENST00000505573 1122 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms