Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 FNDC3CP-201ENST00000420795 1155 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC007560.1-201ENST00000426912 237 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 EZH2P1-201ENST00000431167 291 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 ARF4P4-201ENST00000439608 520 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AL714022.1-201ENST00000439897 151 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 Z99127.2-201ENST00000441426 334 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 RBMY2UP-201ENST00000453474 324 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 RN7SL863P-201ENST00000462370 296 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC116337.2-201ENST00000477662 156 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC073522.1-201ENST00000483312 377 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 MLLT10P2-201ENST00000506434 249 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 COL6A4P2-205ENST00000509855 506 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC091826.1-201ENST00000514065 313 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 SNORA70.16-201ENST00000516390 95 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 ATP5F1P5-201ENST00000526403 760 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 MIR5186-201ENST00000577504 120 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 MIR4448-201ENST00000584360 86 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC010615.3-201ENST00000597319 394 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC079089.3-201ENST00000603094 673 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC211433.2-201ENST00000608433 387 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC005046.1-201ENST00000608515 625 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AL136295.6-201ENST00000610486 658 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 MIR6716-201ENST00000613413 80 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC007318.2-201ENST00000620999 243 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
SPTSSBQ8NFR3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 RN7SKP226-201ENST00000364912 300 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 SNORA9-201ENST00000384215 133 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 SNORA7.4-201ENST00000384249 137 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 CYCSP45-201ENST00000402289 315 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 SEPT2P1-201ENST00000419651 180 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 COTL1P1-201ENST00000422309 375 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC098614.2-201ENST00000426040 255 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 ATP5JP1-201ENST00000431631 322 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 CEACAMP9-201ENST00000442990 513 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 OSTCP8-201ENST00000445117 448 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 MTCYBP3-201ENST00000445588 1137 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 NANOGNBP1-201ENST00000448444 480 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 MORF4L1P4-201ENST00000450245 976 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 PNPLA4P1-201ENST00000458328 305 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC104687.1-201ENST00000485829 412 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 MTCYBP17-201ENST00000503579 789 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC008413.1-201ENST00000511864 177 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC104057.1-201ENST00000515547 497 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC025755.1-201ENST00000521306 278 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 CYCSP26-201ENST00000534107 320 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 FAM60BP-201ENST00000578364 658 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AP004247.3-201ENST00000608682 624 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC103710.4-201ENST00000609301 899 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 MIR6875-201ENST00000617506 72 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 uc_338.20-201ENST00000621563 178 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AC243312.2-201ENST00000623340 601 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AP006248.3-201ENST00000623580 594 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 AL049781.1-201ENST00000623195 3585 ntBASIC1.39□□□□□ -2.19
SPTSSBQ8NFR3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC092593.1-201ENST00000515413 1815 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms