Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 SNORA48.3-201ENST00000391081 134 ntBASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 AL590084.1-201ENST00000407885 387 ntBASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 AL138785.1-201ENST00000425821 331 ntBASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 AP003499.2-201ENST00000624100 483 ntBASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 RPL38P4-201ENST00000502376 214 ntBASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 AC004486.1-201ENST00000546846 233 ntBASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 CU459211.1-201ENST00000635667 749 ntBASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 AC107021.2-201ENST00000567714 2095 ntBASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CFAP43Q8NDM7 SNORA67.3-201ENST00000384366 140 ntBASIC3.32□□□□□ -1.88
CFAP43Q8NDM7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.32□□□□□ -1.88
CFAP43Q8NDM7 SNORD13-201ENST00000459299 104 ntBASIC3.32□□□□□ -1.88
CFAP43Q8NDM7 NAMPTP2-201ENST00000505629 1115 ntBASIC3.32□□□□□ -1.88
CFAP43Q8NDM7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.32□□□□□ -1.88
CFAP43Q8NDM7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.32□□□□□ -1.88
CFAP43Q8NDM7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.32□□□□□ -1.88
CFAP43Q8NDM7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CFAP43Q8NDM7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.32□□□□□ -1.88
CFAP43Q8NDM7 AL450326.2-201ENST00000421913 1962 ntBASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 RWDD4P2-201ENST00000426392 563 ntBASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 AL118520.1-201ENST00000450770 291 ntBASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 RWDD4P1-201ENST00000488019 565 ntBASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 VTA1P2-201ENST00000520205 911 ntBASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 AC060766.3-201ENST00000591442 263 ntBASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CFAP43Q8NDM7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 CR769767.1-201ENST00000436337 346 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 TBCAP3-201ENST00000512475 312 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 RPP40P2-201ENST00000603596 712 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 AL359198.2-201ENST00000611836 194 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 AC091834.1-201ENST00000614543 472 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 MIR6132-201ENST00000622083 109 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 SNORA62.2-201ENST00000364672 152 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 RPL39P40-201ENST00000445481 146 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 AL049830.2-201ENST00000480072 201 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 CCNHP1-201ENST00000513311 678 ntBASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.3□□□□□ -1.88
CFAP43Q8NDM7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 EI24P1-201ENST00000416584 867 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL445646.1-201ENST00000431784 216 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 OR4K11P-201ENST00000431829 904 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 CFTRP1-201ENST00000456646 183 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.6-201ENST00000603753 252 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.11-201ENST00000604059 253 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.10-201ENST00000604330 253 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AC008162.1-201ENST00000604718 254 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.1-201ENST00000604752 252 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.2-201ENST00000604983 252 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.5-201ENST00000605253 252 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.4-201ENST00000605279 254 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.12-201ENST00000605291 253 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.8-201ENST00000605353 252 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.9-201ENST00000605428 253 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AL670379.7-201ENST00000605823 252 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 AC108479.2-201ENST00000617314 601 ntBASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.29□□□□□ -1.88
CFAP43Q8NDM7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CFAP43Q8NDM7 MIR583-201ENST00000384846 75 ntBASIC3.28□□□□□ -1.88
CFAP43Q8NDM7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CFAP43Q8NDM7 AC055855.1-201ENST00000489563 579 ntBASIC3.28□□□□□ -1.88
CFAP43Q8NDM7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.28□□□□□ -1.88
CFAP43Q8NDM7 YWHAEP7-203ENST00000622054 312 ntBASIC3.28□□□□□ -1.88
CFAP43Q8NDM7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CFAP43Q8NDM7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CFAP43Q8NDM7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.28□□□□□ -1.88
CFAP43Q8NDM7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CFAP43Q8NDM7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CFAP43Q8NDM7 AC073310.1-201ENST00000423226 1033 ntBASIC3.27□□□□□ -1.89
CFAP43Q8NDM7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.27□□□□□ -1.89
CFAP43Q8NDM7 RPS27AP18-201ENST00000515536 459 ntBASIC3.27□□□□□ -1.89
CFAP43Q8NDM7 AP003385.6-201ENST00000531603 374 ntBASIC3.27□□□□□ -1.89
CFAP43Q8NDM7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.27□□□□□ -1.89
CFAP43Q8NDM7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CFAP43Q8NDM7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.27□□□□□ -1.89
CFAP43Q8NDM7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms