Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL589872.1-201ENST00000426602 288 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 RPL37P1-201ENST00000432310 284 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 SKP1P1-201ENST00000438081 489 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC108751.2-201ENST00000469993 231 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 RPL23AP2-201ENST00000471227 466 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 MTND1P3-201ENST00000484956 952 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC114967.1-201ENST00000504890 259 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 RNA5SP73-201ENST00000516744 108 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 OR5AL2P-201ENST00000532185 920 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 DYNLL1P4-201ENST00000549314 266 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AL512360.1-201ENST00000555346 234 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AL157394.1-201ENST00000562983 1224 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC115085.1-201ENST00000588924 229 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC008739.3-201ENST00000603262 127 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC005034.5-201ENST00000604219 466 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AL136221.1-201ENST00000621449 509 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 AL445264.1-201ENST00000621719 171 ntBASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SLC44A3Q8N4M1 ZNF680P1-201ENST00000436625 1469 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-289P-201ENST00000364093 107 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-178P-201ENST00000384631 104 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AL078604.1-201ENST00000404609 466 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC234782.4-201ENST00000417646 1048 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 ISCA1P6-201ENST00000427740 390 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC104850.1-201ENST00000435940 476 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 RPS26P2-201ENST00000440331 348 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 MTND5P14-201ENST00000441481 1267 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AL118496.2-201ENST00000448300 230 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 RPL35AP15-201ENST00000468042 339 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC005912.1-201ENST00000495392 255 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 TMEM251P1-201ENST00000503717 318 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC018710.1-201ENST00000506509 158 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC006390.1-201ENST00000508068 283 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AF235103.2-201ENST00000525753 346 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC123904.3-201ENST00000547218 814 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 CBX3P5-201ENST00000552017 521 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 MIR3944-201ENST00000581277 108 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 SNORD39.3-201ENST00000584451 71 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC245014.2-201ENST00000603689 287 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 BNIP3P11-201ENST00000603878 563 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AL009028.1-201ENST00000604895 802 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC246785.4-201ENST00000605374 287 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AC078899.5-201ENST00000612475 178 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 CR392039.5-201ENST00000623201 510 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 AL672167.1-205ENST00000641112 3080 ntBASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A3Q8N4M1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 HSPA8P17-201ENST00000427029 1382 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms