Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AC022447.3-201ENST00000506865 495 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AC022790.1-201ENST00000522872 204 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 TPRKBP2-201ENST00000565969 475 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AC090578.1-201ENST00000604955 591 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AF250324.2-201ENST00000608299 610 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AC109347.2-201ENST00000610220 349 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AP001506.1-201ENST00000615444 211 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 U4.5-201ENST00000617137 123 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AC068722.2-201ENST00000618734 544 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 AC073534.2-201ENST00000620377 381 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 NCAPGP1-201ENST00000505112 1814 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 BDP1P-201ENST00000582658 1990 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 LARP1BP1-201ENST00000506036 1359 ntBASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.76□□□□□ -1.81
CLIP4Q8N3C7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 OR4G2P-201ENST00000328113 903 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 RN7SKP44-201ENST00000363602 316 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 SNORD35B-201ENST00000363660 87 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 Y_RNA.248-201ENST00000364501 109 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 RNU6-769P-201ENST00000384407 104 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 RNU4-25P-201ENST00000410569 230 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 RPS15AP40-201ENST00000419621 391 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC007742.1-201ENST00000425789 329 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AL445669.1-201ENST00000426743 755 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC011742.1-201ENST00000431448 434 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AL596276.1-201ENST00000434465 418 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 ELOCP26-201ENST00000436067 329 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 TRBV26-201ENST00000456572 344 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 MTCO1P42-201ENST00000457379 726 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC091167.1-201ENST00000492017 396 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 RPL9P6-201ENST00000492764 598 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC090453.1-201ENST00000495560 436 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC108941.1-201ENST00000502853 530 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC093840.1-201ENST00000511599 336 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC024589.1-201ENST00000512207 263 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC108064.1-201ENST00000513791 460 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 RNU6-314P-201ENST00000516574 104 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 HSPA8P13-201ENST00000523715 472 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AL161713.1-201ENST00000555538 145 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 ZNF519P2-201ENST00000557032 169 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC009977.1-201ENST00000586015 570 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 OR4G1P-201ENST00000588632 938 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC244505.7-201ENST00000599675 272 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AL451044.1-201ENST00000604867 238 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 BCRP9-201ENST00000605312 388 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC128687.2-201ENST00000609657 566 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AL355073.2-201ENST00000612106 557 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 MIR7151-201ENST00000617477 60 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC138649.3-201ENST00000622154 254 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 AC000123.2-201ENST00000623124 461 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 MIR3653-201ENST00000625572 110 ntBASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLIP4Q8N3C7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AL049555.1-201ENST00000562834 1933 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms