Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AL354798.1-201ENST00000622505 329 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AL136964.1-201ENST00000622038 2990 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC092447.10-201ENST00000620607 1652 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 RNU6-213P-201ENST00000384051 104 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 Y_RNA.436-201ENST00000384097 102 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 RNU6-769P-201ENST00000384407 104 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 RNY3P10-201ENST00000384764 102 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 RN7SKP142-201ENST00000411236 328 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC109583.1-201ENST00000432156 268 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 MTCYBP45-201ENST00000435243 565 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 THAP5P1-201ENST00000439089 262 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AP000542.1-201ENST00000448473 371 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 SNORD108-201ENST00000459332 71 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 snoU13.3-201ENST00000459441 104 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AP000797.1-201ENST00000478870 387 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 HMGB1P36-201ENST00000487709 576 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 RNA5SP179-201ENST00000517284 121 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC025881.1-201ENST00000518851 512 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AP000873.5-201ENST00000533906 236 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC012414.6-201ENST00000568241 401 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC025946.2-201ENST00000603398 234 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC091167.4-201ENST00000605079 184 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 BCRP9-201ENST00000605312 388 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC084782.3-201ENST00000612282 578 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC025594.3-201ENST00000613068 790 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC006133.1-201ENST00000617106 264 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC092140.2-201ENST00000618027 521 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC093591.3-201ENST00000634516 308 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 DCAF13P1-201ENST00000495256 1330 ntBASIC3.68□□□□□ -1.82
BEST3Q8N1M1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BEST3Q8N1M1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 RNY4P24-201ENST00000362735 96 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 RNA5SP258-201ENST00000362750 119 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 RNU6-623P-201ENST00000363143 105 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 RNU6-1279P-201ENST00000383917 103 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 Y_RNA.553-201ENST00000384670 102 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 RNU6-837P-201ENST00000391056 108 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AL356421.1-201ENST00000403255 413 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 MTCYBP36-201ENST00000404146 440 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AC127526.1-201ENST00000417526 366 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AL445669.1-201ENST00000426743 755 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AL445584.1-201ENST00000431451 330 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AC007389.2-201ENST00000434630 306 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 RPL7P28-201ENST00000437739 740 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.67□□□□□ -1.82
BEST3Q8N1M1 OR9M1P-201ENST00000459641 921 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 PPIAP15-201ENST00000479662 484 ntBASIC3.67□□□□□ -1.82
BEST3Q8N1M1 AL139099.1-201ENST00000497398 403 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms